Prunus dulcis (almond): 117619112
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Entry
117619112 CDS
T07328
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117619112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117619112
Membrane trafficking [BR:
pdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117619112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
117619112
NCBI-ProteinID:
XP_034204853
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Position
2:12674051..12681998
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AA seq
761 aa
AA seq
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MSEFLDLESQDGVRMPWNVIPGTKQESTNSVVPVSAIYTPIKPFPSMPVLPYAPLRCRTC
RSVLNPFSTVDYAAKIWICPFCFTRNHFPPHYASISDENLPAELFPQYTTIEYDSSLEKP
TTPPVFIFVVDTCMIEEELSFLKSALSQALGLLPDHSLVGLITFGTFVHVHELGFSSVPK
TYIFKGSKEVNKDQLLEQMSFFLKKPRPTTGVIAGPRDGLSTESIARFLLPASDCEFALN
SVLEELQKDPWPVPADQRAARCTSTALSVAGSLLGACVPGSGARIMAFIGGPSTEGQGAI
VSKNLSEPIRSHKDLDKDSAPHFHKAVKFYEGLSKQLVHQGHVLDLFACALDQVGIAEIK
IAVERTGGLVVLAESFGHSVFKDSLKRVFQLGDYELGLSSNGIFEINCSKDVKVQGIIGP
CASLEKKGPLSSDTVVGQGSTSAWKMCGLDKATSLCLIFEIVKKEIPDATVQPTSNQFYF
QFLTYYQHSSGQMRLRVTTLSRRWVAGPGSLQDLIAGFDQEAAAVVMARLVSFKMETEAE
FDPIRWLDKSLIRMCARFGDYQKDSPSSFSLSPRFSIFPQFMFHLRRSQFVQVFNNSPDE
TAYFRMILNRENVANSVVMIQPSLISYSFHSGPEPALLDVAAIAADRILLLDAYFTVVIF
HGSTIAQWRKAGYQDLPEHQAFAQLLQAPRDDGDQIIKERFPVPRLVICDQHGSQARFLL
AKLNPSATYNNEAPLPGGDVIFTDDVGFEVFLDHLQRLAVQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattcctggaccttgaatcccaagacggcgttcgaatgccatggaatgtgatt
ccaggcacaaagcaagagtccacaaacagcgtagtcccagtctccgccatctacactccg
atcaagcccttcccctccatgcccgtcctcccctacgccccgctccgctgccgcacctgc
cgctccgtcctcaacccattctccaccgtcgattacgccgccaagatctggatctgcccc
ttctgcttcacccgcaaccacttccctccccactacgcctccatatccgacgaaaacctc
cccgcggagctcttcccccagtacaccaccatcgaatacgactcgtcgctcgagaaaccc
accacgcctccggtcttcattttcgtcgtcgacacgtgtatgatcgaggaggagctgtcg
tttctcaagtccgctctttcccaagctctgggtcttcttccggatcactctcttgtgggt
ctcatcacttttgggaccttcgtacatgtccacgaattgggtttctccagtgttcccaag
acttacatcttcaaaggatcgaaggaagtcaacaaggaccagctgcttgaacagatgagt
ttttttctcaagaaacccaggccgactactggggtaattgctggacctcgggacgggctg
agcaccgagagcattgcccggtttttattgccggcgtcggattgtgagtttgcgcttaat
tcggtgttggaggagttgcagaaggacccttggcctgtaccggctgatcagcgggctgcc
cggtgcaccagcactgcgcttagcgtggctggcagcttgttgggagcttgtgtgccgggt
tctggggcccggattatggcgtttattggtgggccctccacggaaggccagggtgctatt
gtgtcgaaaaacctatctgaaccaattcgttctcacaaggacctggataaagattctgcc
ccacattttcataaagccgtgaagttctatgagggactttcaaagcagcttgtacatcaa
ggacatgttcttgatctttttgcttgtgcccttgaccaggtggggattgcagaaattaaa
attgcagttgaaagaactggaggactagttgtgcttgccgaaagttttggccattcggtg
tttaaggactcacttaaacgggttttccagttgggtgattatgagcttggtttgtcatca
aacggtatatttgagataaactgctcaaaagatgtcaaagttcagggcattattggtcct
tgtgcatctcttgaaaagaaaggtcctttgtcctccgacacagttgttggtcaggggagt
acaagtgcatggaagatgtgtggccttgacaaagcgacatctttatgtctaatatttgaa
attgttaagaaggaaatcccagatgccactgttcagcccactagcaatcagttttacttc
caatttctaacttattatcagcatagtagtggtcaaatgagacttcgtgttacgaccctt
tcgaggagatgggttgctggacctggaagcctacaggacttgattgctggatttgaccaa
gaagcagctgctgttgtcatggcacgtctagtttctttcaaaatggaaactgaggcagag
tttgaccctataagatggctggataaatcattgatacgtatgtgtgctcggtttggagat
taccaaaaggacagtccatcttctttcagcttatctccacggttttcaatcttccctcaa
tttatgtttcatttacgacgttctcagtttgtccaggtttttaacaacagcccagatgaa
accgcatacttcagaatgatcctaaaccgagaaaatgttgccaattcagttgtgatgatt
cagccttcattgatttcatattcatttcattcaggcccagaaccagcacttcttgacgtt
gctgccattgcggcagacaggattctgctcttagacgcctactttactgttgttattttt
catggttcaactattgctcaatggcgaaaagcagggtatcaggatctgcctgaacatcag
gcatttgctcaattgctacaagctcctcgtgatgatggagatcaaattatcaaggaaaga
tttccagtacctcgcctggtgatttgtgatcagcatggttctcaggcccgttttcttttg
gcaaagttgaatccttctgctacttataacaatgaagctccacttccaggaggggatgtt
atctttacagatgatgttggttttgaagtcttcttggatcatctccagagattagcagtt
caataa
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