Prunus dulcis (almond): 117619284
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Entry
117619284 CDS
T07328
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Module
pdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117619284
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117619284
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
117619284
NCBI-ProteinID:
XP_034205094
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Position
1:complement(36522843..36527016)
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AA seq
436 aa
AA seq
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MQDILISFFIFCIASSQLLGIVYSKTTFDVVKFGAVGDGQTDDTEAFVKAWTALCGAAAG
GDDVPTLTIPGGKTFLLQPSEFEGPCKSKSVHVQVSGNLVAPKTPDAWKVCPPHSWLVFR
KVGNLIIDGSGKIDGQGSTWWGEDSSLINALHFLRCDHLRLSGLTHINSPRSHIGISTSN
DVEISHLTIIAPDESPNTDGINVTNSTYVNIHDSKIGTGDDCITIMSGSSNVRIAKIACG
PGHGISVGSLGADGAYAAVENVYVRDCSFIGTQNGARIKTWPGGSGYARNITFEHITLTA
TKNPIIIDQQYCNGAHDCAKQSKAVLVSNVRFTDFRGTCGNEEAIKLDCNHISGCQNIEL
VKINITSTVPSKKVYASCNNAKGNSGSTVPTVSCLNGAGDGGNGSGGGGGGKGDGYESGG
VGDGRGDGIGGGDNGF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatacttattagctttttcatattttgcattgcttcatctcagttacttggt
attgtgtacagcaaaacaacatttgatgttgtcaaatttggtgctgttggagatggacaa
actgatgatacagaagcttttgtaaaagcatggacagccttatgtggagcagctgcaggt
ggtgatgacgtaccaacacttactataccagggggaaaaacattcttattgcagccctcg
gaatttgaaggtccctgcaaatcaaagagtgttcatgtgcaggtctcgggtaatttggtg
gcacccaaaacacccgatgcatggaaagtgtgtccaccacatagttggcttgtatttaga
aaagtgggcaatctcataatcgatggttcaggaaaaatcgacggtcagggttcaacttgg
tggggcgaagatagctctttgataaatgctctacacttcctccgatgtgatcatcttcga
ttgagtggacttactcatataaacagcccaagatctcatattggtataagcacaagcaat
gacgtggagatctcccatcttactataattgcacctgatgaaagtccaaacacagatgga
attaacgtcacaaactcaacctatgtcaatattcatgactctaaaattggaactggtgat
gactgcattacaatcatgtctggttcttccaatgttaggatagccaagattgcttgcgga
ccaggtcatggaattagtgtgggaagcttaggagcagatggggcttatgctgcagtggaa
aatgtatacgtgagagattgtagttttataggaactcaaaatggagcaagaatcaagaca
tggccgggtggatccggatatgctaggaatataacctttgagcacatcacacttaccgca
actaaaaaccccatcattattgaccaacaatactgcaacggtgctcacgattgcgcaaag
cagagcaaagctgtgctggtgagcaatgtgagattcactgattttagaggaacttgtgga
aatgaggaggccatcaaattagactgcaaccacatttcgggttgtcaaaacattgaactg
gtgaaaataaatatcacctcaacggttccaagtaagaaggtttatgcaagttgcaacaat
gccaaaggaaattccggctctactgtgcccactgtatcttgcctcaatggtgctggtgat
ggtggtaatggcagtggtggtggcggtggtggtaagggcgatggatatgagagtgggggt
gttggtgatggcaggggtgatggtattggaggtggggataatggtttttag
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