Prunus dulcis (almond): 117619546
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Entry
117619546 CDS
T07328
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117619546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117619546
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117619546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Utp13
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF12
PEP5_VPS11_N
Beta-prop_NWD2_C
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Ge1_WD40
WD40_like
VPS11_N
Nbas_N
Cytochrom_D1
SieB
Motif
Other DBs
NCBI-GeneID:
117619546
NCBI-ProteinID:
XP_034205418
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Position
2:25915375..25922122
Genome browser
AA seq
875 aa
AA seq
DB search
MASLPLKKNYRCVPSLQQFYSGGPFVVSSDGSFIACKCGDSIKIVDTSNASIRSTIEGDS
EDVTALALSPDDKLLFSSGHSRQIRIWDLATFKCVRSWKGHDGPVMGMACHPSGGLLATA
GADRKVLVWDVDGSFCTHYFKGHKGVVSSVLFHPDPTKSLLFSASDDTTVHVWDLLAKKC
VATLNGHHSTVTSMALSEDGTMLLTAGRDKVVILWNLHDFSCMKTVTTYEVLEGVCAIHS
GPLLSSCLSSCKQKSGKKSGLPAICFITVGERGVVRIWNSEGAVCLFEQKSSDVTPSSDG
DESKRGFTAAVMLPSDKGLLCVTADQEFLLYSPVKVPEGTLEFVLSKRLVGYNDEIVDMK
FLGDEEQFLAVATNIEQVRVYDVASMSCSYVLAGHTGIVLCLDTCVSSCGRTLIVTGSKD
NTVRLWESESRCCLGLGIGHMGSIGAIAFSKKRKDFFVSGSSDRTLKVWNLDGLPDNGEK
PINLKAKAGVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVPVVVLKGHKRGVW
SVEFSPVDQCVITASGDKTIKIWAISDGSCLKTFEGHTTSVLRASFLTRGTQFVSCGADG
LLKLWMVKTDECVATYDQHENKVYALAVGKNTEMLATGSSDAVINLWYDCTASDKEEAFL
REEEGVLKNQELENAVLDADFTKAIQVAFELRRPHKLYECFSQVWRKRKNEKQIEKSLQT
LGKEELKLLFEYVREWNTKPKLCHVAHFVLSKVFSILNPIEITEIKGIDEVLEGLLSYSQ
RHFSRMDRHVTSTFLVNYTLAGMSVIEPETDTRVMDDRSLMHSVGDDENGTLIQELEDEE
QKQTSQGLKEKAVSKKRKSKKSKDGVNKKVKGSSL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctacctctgaagaagaactaccgttgcgtgccctctctgcaacagttctac
tccggcgggcccttcgtggtctcatccgacggctccttcatcgcctgcaagtgcggcgac
tccattaagatagtggacacctccaacgcctcaattcggtcgaccattgaaggcgactct
gaggacgtcacagctttggcccttagccccgacgacaagttgctcttctcctctggccac
agtcgccaaattaggatttgggacctcgccaccttcaagtgtgtgcgttcttggaagggt
catgatgggcctgtgatgggaatggcttgtcacccatctgggggattgcttgcgactgca
ggagctgataggaaggttcttgtttgggatgttgatggtagcttctgcactcattacttt
aaaggtcacaaaggagttgtttctagtgttctcttccatcccgatcctactaaatcactt
cttttctccgcaagtgatgatacaactgtgcatgtttgggacctattagccaagaagtgt
gttgcaacgcttaatgggcatcactcgacggtcacttctatggcactatctgaagatggg
acgatgttgctcacagctggaagagataaggttgtaatcttgtggaaccttcatgacttt
agctgcatgaagactgtaacaacatatgaggtccttgaaggtgtgtgcgcaatccattct
ggacccctgttatcttcctgtttgagttcctgcaagcagaagagtgggaagaaaagtggg
ttacctgcaatatgttttataacagttggtgaacgcggggttgtacggatttggaattct
gaaggtgcagtttgcctatttgagcaaaagtcctcagatgttactccctcctcagatggg
gatgaatcgaaaaggggtttcactgccgctgtcatgctaccgtcagataaagggctgctt
tgtgtgactgccgatcaggagtttcttttatattccccagttaaggttcccgaagggacg
ttggaatttgtcctaagcaaaagacttgtaggatacaatgatgagattgtggatatgaag
tttttaggtgatgaggaacaatttcttgctgttgccacaaatattgaacaggtacgagta
tatgatgttgcatccatgtcgtgttcttatgtgctggcaggtcataccggaattgttcta
tgtcttgacacctgcgtatcaagttgtggaagaacacttatagtgactggaagcaaggac
aacactgttcggttgtgggaatcagaaagtagatgttgccttggtcttggcataggtcac
atgggaagtattggagctattgctttctcaaaaaagcgtaaagactttttcgttagtggt
agtagtgatcgtaccctcaaggtgtggaatttggatggtcttccagacaatggggaaaag
cctataaatttgaaagcaaaggctggtgtagcagcccacgataaggatatcaattcagta
gctgttgcacctaatgatagtttagtttgtagtggttcacaggatcgcactgcttgtgtc
tggaggcttccagatcttgtaccagtagttgtacttaagggtcataaaaggggcgtttgg
tctgtggaattttctccagttgatcaatgtgttataacagcttctggtgacaaaacaata
aagatatgggccatatctgacggttcatgcttgaaaacatttgaagggcatacaacaagt
gtattaagagcatcattccttactcgtggaacccagtttgtttcttgtggtgctgatggt
ttgttaaagctgtggatggtcaaaaccgatgaatgcgttgctacatatgatcagcatgag
aacaaggtttatgccttggctgttggaaagaacacagaaatgcttgcaactggcagcagt
gatgctgtcatcaatctatggtacgattgtactgcctctgataaagaggaagcttttctt
agagaggaggaaggtgttttaaagaatcaagaactagaaaatgctgtattagatgctgac
tttactaaagcaatccaagttgccttcgagcttcgcaggcctcataagctttatgagtgt
ttttctcaagtttggaggaagagaaaaaatgaaaagcagatagagaaatcccttcagacc
cttggcaaggaagagctcaagctattatttgaatacgttcgagaatggaatacaaagcca
aagctgtgtcatgttgcacacttcgtgctttctaaagttttcagcatccttaatccaata
gagattactgagataaaaggcattgacgaagtccttgaaggtctcttgtcgtattcccag
aggcattttagcaggatggacaggcatgtaacaagcacatttttggtaaactacactctt
gctgggatgtcagtcattgaaccagagacagatacaagagtaatggatgacaggtctttg
atgcactctgttggtgatgatgagaatgggacgttaatacaggaacttgaagatgaggag
caaaagcagacctctcaagggttgaaagaaaaagcagtttcgaagaaacggaaatcaaag
aaatcaaaagatggtgtcaataagaaagttaagggatccagcttataa
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