Prunus dulcis (almond): 117619712
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Entry
117619712 CDS
T07328
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117619712
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117619712
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Helicases
117619712
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
117619712
NCBI-ProteinID:
XP_034205610
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All DBs
Position
2:complement(22587266..22590969)
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AA seq
591 aa
AA seq
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MDADSFNPNSALSDTRFSDLKPPLSEPVLEALAQGGFEFCTPVQAATIPLLCRFKDVAVD
AATGSGKTLAFVVPLVEILRRASTVPKPQQVMGMIISPTRELSSQIYNVAKPFISTLPNF
KCVLLVGGGQVKADTKQIEEEGANLLIGTPGRLYDIMERMDGLDLRDLEILILDEADRLL
DMGFQKQINDIISRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRAETKSNNSALS
QQLASSKTPSGLAIEYLECEADKKPSQLVDLLVKNKSNKTIVYFMTCACVDYWGLVLPLL
GSLKGFPLIALHGKMKQAARDKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDTPQ
DPNVFIHRVGRTARMGRQGSAIVFLLPKEEAYVEFLRIRRVPLQERKCSDDVSDVIPQIR
SAAKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPAMPEVKH
HSLSTEGFIPVKDINLEEIKFKDKSREKQRKKNLQAKKEAKKQEVKPQKPNKSANDTATQ
MRKKTAKQRRAAQTVEDEDELAREYRLLKKLKRGDIDESQFAKLTGTEDLL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgactctttcaaccccaacagcgcgctaagcgacacgcgcttctctgacctg
aagccgccactctccgagccggtcctcgaagccctagcccaaggcgggttcgagttctgc
acgccggttcaagccgccacaatccccttactatgcaggttcaaggacgtggcggtcgac
gccgctaccggctcaggcaaaaccctagccttcgtggttccactggtggagatactccga
cgagcttcaaccgttccaaaacctcagcaggtgatgggaatgattatatctccgactagg
gagctgtcttcgcaaatatacaacgtggcaaaacccttcatttcgacgctgccgaatttc
aagtgtgtgcttttggttggtggagggcaagtgaaagcagacacgaagcaaatagaggag
gaaggagccaatttgttgattggcactccggggagactatacgacattatggaacgcatg
gatggcttggatttgcgagaccttgagattttgattttagatgaggctgataggctcttg
gatatgggtttccagaagcagataaatgatattatatctcgcttgccaaagcttcgtaga
actggtctcttttcagctacccaaactgaagcagttgaagagctggccagagcaggacta
aggaatcctgtgagagtcgaagtacgagcggaaacaaaatcgaataattcggcattgtcg
caacagttagcctcttcaaaaacaccttctggccttgccattgagtatctggagtgcgaa
gcagacaagaaaccgtcacaacttgtggatctccttgttaagaataagtctaacaagacc
atagtatacttcatgacttgtgcttgcgttgactactggggacttgttcttccattgctt
ggttctttaaagggtttccctttgattgctctacatgggaagatgaagcaggctgcaagg
gataaagctttagcctcatttacatctctctcaagtggcatccttctatgtactgatgtt
gcagctcgtggactcgatattccaggtgttgactgtatagtgcagtatgatacccctcaa
gatccaaatgttttcatacatagagttggccgaacagctcgtatgggtagacaaggaagt
gcaatcgtttttctgttgccaaaggaggaagcttatgtagaattcctgcggataagaaga
gtgcctcttcaagaaaggaaatgttctgatgatgtttctgatgttattccccagatacga
tctgccgcaaaaaaggaccgtgatgtcatggaaaagggactcagggcatttgtttcttac
atccgtgcatataaagaacaccattgctcatacattttcaggtggaaagaacttgaaatt
gggaaactgggcatgggattcggactactgcagctccctgcaatgcctgaggtcaagcac
cactctctttccacagagggtttcatccctgttaaagacatcaacttggaggagatcaag
tttaaggataaatctcgtgagaagcaaagaaagaagaatctgcaagcaaagaaagaagca
aaaaagcaagaagttaaacctcaaaaacccaacaaaagcgcaaatgatacagctactcag
atgaggaagaaaacagctaagcaaagacgtgctgcccagacagttgaagatgaagatgag
ttggcaagagaataccgcttgctaaagaagctcaaaaggggggatattgacgaaagtcaa
tttgcgaagttaacaggaacggaagacttactttga
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