Prunus dulcis (almond): 117620334
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Entry
117620334 CDS
T07328
Name
(RefSeq) uncharacterized protein LOC117620334 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117620334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117620334
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117620334
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117620334
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117620334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
117620334
NCBI-ProteinID:
XP_034206388
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All DBs
Position
2:6735347..6741575
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AA seq
614 aa
AA seq
DB search
MLPHYNSFPHNSNQVHVNGSSAPSHQIQPQLGIKNNQVPIPFSNANAHLSNGHGGAMPNM
PPSMIAQPNFMGVPNNLHPMQSNHLGMPQFGSVGPTSQPGQPHVGFFGSQNNAHSMNSVA
SFPLHGQFCNLVQNVNQAVSSQPPGQLLGHNLLNLPQQINQNMGLPYGQFCLPNPLQNMN
QFVQMQMHNPSQLGPNYAFAGLNQAPQATVSQNSPFFATHQFGNVHSNQAGQQVNQNQQN
LVLPAMQGTQFGAYSNQAGQQVNQNQQNSVLPAKQGTQFFQGNHTNTGGVYSSNTNWKHS
PSKSFTKHPKRGVQPQGGFQNSQFHHMKNAKGKFAFPNGNKGKGLINESKGKFTNQGGEG
KRSLSLPYTEQEIQRWREERRRHYPSKSNIEKKLSEKLINSEVIEREAKMRREQLKEILT
KQAELGVEVAEIPSYYLEDSNQGHRREDNKYFTKKGRLPNNFGKREKYDKKDRFAKRQKS
HHKDSSNDPSFSKREPTLLQKLLSADIKRDRSRLLQVFRFMVTNSFFKDCPEKPLKFPTV
AVKESGCNEDMAEELSSFAAKDASKGSDNSMVEIVHNNDYEYHNDVCNYDDGGGEDDEEG
GTERAEEEEGEIIN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgctacctcactacaattcgtttcctcacaattccaaccaagttcacgtcaatggtagc
tctgctccatctcaccagatacaacctcaattgggtatcaagaataatcaagttccaatc
ccgttcagtaatgctaatgcacatttaagcaatgggcatggaggggccatgcccaatatg
ccaccttccatgattgctcaacccaatttcatgggtgtacctaacaaccttcatcctatg
caaagtaaccatctgggtatgcctcaattcggttctgttggtcctacatctcaaccaggt
cagccccatgttggatttttcggttcacaaaataatgcacacagtatgaactccgttgct
tcctttccgcttcatgggcaattctgcaatttggtgcagaatgtgaatcaagcggtttca
tcgcagccgcctgggcaattacttgggcataacctgttaaatttaccacaacagatcaac
caaaatatgggtttgccatatggacaattctgtttgccaaatccattgcaaaatatgaat
caatttgtgcaaatgcaaatgcataatccatcccaacttggtcctaattatgcttttgcg
ggattgaatcaagcacctcaggctacagtttctcaaaattcccccttttttgcaactcat
cagttcggtaatgtgcattctaatcaggcaggccagcaagttaaccagaatcagcaaaac
ttggttctgcctgcaatgcaagggacacagtttggtgcgtattctaatcaggcaggccag
caagttaaccagaatcagcaaaactcggttctgcctgcaaagcaagggacacagtttttt
cagggaaatcatacgaacactggtggtgtttacagttcaaataccaattggaaacattca
ccaagcaaaagctttacaaagcatccaaaaagaggggtgcagccgcaagggggatttcag
aattctcagttccatcatatgaaaaatgcaaagggaaagtttgcttttcctaacgggaac
aaaggaaaagggttgataaatgagagcaaaggaaagtttacaaaccaaggcggggaaggg
aaaagatctctttctttgccctatactgaacaagagattcagcggtggcgtgaagaacgc
agaaggcactacccatcaaaatccaacatagagaagaagctgagtgaaaagctgataaac
tcagaggtcattgagagagaggccaaaatgcgacgagagcaactgaaggagattcttaca
aagcaggctgagttgggagttgaagttgccgaaataccatcatactaccttgaagattca
aatcaagggcatagaagagaagacaataagtatttcactaagaaggggagattaccaaac
aattttggtaagagagaaaaatatgataaaaaggatcggtttgccaagaggcaaaaatct
catcacaaggattcatctaatgacccttctttcagcaaaagggagccaaccttactgcag
aaacttcttagtgcagatataaagagagatagaagccgtctgctgcaggtgtttaggttc
atggtgacaaactctttcttcaaagattgtcctgaaaaacctttgaaatttcctacggta
gcagttaaagaaagtgggtgcaatgaagacatggctgaagaactgtcttcatttgcagcg
aaagatgcttctaaaggcagtgacaattccatggttgaaatagttcataacaatgattat
gaatatcataatgatgtttgtaattatgatgatggtggtggtgaagatgatgaagaaggg
ggaactgagagagctgaggaagaagagggagagatcataaactag
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