Prunus dulcis (almond): 117620391
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Entry
117620391 CDS
T07328
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117620391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117620391
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
117620391
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
117620391
NCBI-ProteinID:
XP_034206467
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All DBs
Position
2:complement(15942328..15947067)
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AA seq
686 aa
AA seq
DB search
MARNKDAMVLLIDVSPSMHKALPEIEKVCSMLAEKKLIYSKYDEVAVVLFGTEETENELT
KEVGGYEHVVVLQNIKVVDGQLVETLQQLPRGTHDGDFLDAIIVGMDMLIKKYGETYKGK
KRLCLLTNAQFPIKYPLEGTKEDQVSTIAEHMNTHGMRMESIVVRGSLTGEANKSVMDEN
DNLLGIFSKKTCAKLVHVESPTSLLGALRTRKISPVTIFRGDLELSPKMKIKVWVYKKTS
EEKFPTLKKYSDKAPPTDKFATHEVKVDFEYKSVEDPSKVVPPDQRIKGYRYGPQVIPIS
SAEWDAVKFKPEKGVKLLGFSDAKNIMRHYYMKDVNVFIPEPGNTRAILAVSALARAMQD
MNKVAILRCVWRQGQGNVVVGVLTPNVSDNDNIPDSFYFNVLPFAEDVREFQFPSFNNFP
ASWQPNEQQQEAADDFVRMFDLAPPGKEEALPPGLTPNPVLERFYRHLELKSRHPDAAVP
PLDETLRMITEPDKELLSQNGSVLDVCRSRFEVKENPKLKKSSRRFLRDKPTGSNEGHAD
ISDEPNSSEYTSAVKVEKVGDATPVQDFEAMINRRDSPQWVGKAIKDMKNKIHDLVEDSY
EGDNYPKALECLIALRKGCILEQEPKQFNDFLRTLCIFCQEKALGSFCEFLASKELTLIS
KTEAIDSEVTDDEARNFLVKSEPKME
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacaaggacgccatggttttgttgatcgatgtcagtccatcaatgcacaaa
gctcttccagagatagaaaaagtttgctctatgctagcagagaagaagctgatttacagc
aaatatgatgaagtagcagtagttttgtttggaacagaagaaactgaaaatgaactaaca
aaggaagtgggtggatatgagcatgtggtggttttacaaaatatcaaagtagttgatggg
caacttgttgaaactctacaacaactcccacgaggaactcatgatggtgattttcttgat
gctataattgttgggatggatatgctgataaagaaatatggagaaacatacaaaggaaag
aaacgtctttgtctgcttactaatgcacaattccctattaaatatccgctagaaggaact
aaagaagatcaagtcagcaccattgctgaacacatgaatacacatggtatgagaatggaa
agtatagttgtaagaggaagtcttactggggaagcaaataaaagcgtaatggatgagaat
gataatctattgggtatattttcaaagaagacatgtgcgaagttagtgcatgttgagagt
ccaacttcattgctaggtgctctcagaactcggaaaatatctccagttacaatattcagg
ggtgatcttgagcttagccccaaaatgaagattaaggtatgggtttacaagaaaacatcg
gaagagaagtttcccactctgaagaaatattctgataaagcgcctccaactgataaattt
gccacacatgaagtcaaagtggactttgagtacaaaagtgttgaagatcctagtaaagtt
gtacctccagatcagaggattaaaggttatcgttatggccctcaagttattcccatatcc
tctgctgaatgggatgctgtcaagttcaaaccagaaaaaggtgtgaagcttctgggattt
tctgatgctaaaaacataatgcgacactattacatgaaagatgtcaatgttttcatccct
gaaccgggtaatacaagagccattcttgctgtttctgccctagcaagagctatgcaagat
atgaataaggtggcaattttgcgttgtgtttggagacaaggacaagggaatgttgttgtt
ggggtcttgacacctaatgtctctgacaatgataatattcctgattcattttacttcaat
gtgctcccttttgctgaggatgttcgagaatttcaattcccttctttcaataactttcca
gcatcatggcaaccaaatgaacaacagcaagaggctgcagatgactttgtcaggatgttt
gatcttgcaccacctggcaaagaagaggctctgccacctggcttaactccaaatcctgtt
cttgagcgcttttatcgtcatctcgagttgaaatcaaggcacccagatgcagctgtgcct
ccactcgatgaaactctcaggatgattactgaacctgataaagagttgctttctcaaaac
ggatctgttcttgatgtatgtcgcagccgttttgaagtcaaagagaatccaaagctgaag
aaatcaagtaggcgatttttacgagacaagccaactgggtcaaatgagggtcatgctgac
atttctgatgaacctaactccagcgaatatacttctgctgttaaggttgagaaagttggg
gatgctactcctgtccaggattttgaagctatgatcaatcgtagagatagcccacagtgg
gttggcaaagcaattaaggatatgaaaaacaaaatacacgacttagtagaggactcttat
gaaggggataattatcccaaggcactggaatgcttaattgccctccgcaagggttgcatc
ctagagcaagaaccgaaacagttcaatgattttctgcgcactctgtgtatattctgccag
gagaaagccctcggcagtttctgtgaatttcttgcatccaaagagctcaccttgatttca
aagacagaagctatagacagtgaagttacggatgatgaagctaggaattttctggtcaaa
tcagagccaaagatggaatga
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