KEGG   Prunus dulcis (almond): 117620713
Entry
117620713         CDS       T07328                                 
Name
(RefSeq) protein VACUOLELESS1
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    117620713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pdul04131]
    117620713
Membrane trafficking [BR:pdul04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    117620713
   Hops complex
    117620713
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st Ank_2
Other DBs
NCBI-GeneID: 117620713
NCBI-ProteinID: XP_034206770
LinkDB
Position
3:16502723..16509670
AA seq 844 aa
MANVSVAAEWQLLYNRYYRKPEIYRMSWKHVELNRNKVACAPFGGPIAVIRDDSKIVQLG
GESAQRKLRIFSSSGHLLGETIWKHPGGRLIGMAWTDDQTLVCLVQDGTVFRYTIHTELL
EPSISMGQECFERNVVDCVFWGNGLVCITETNQLFCISDFKNPNPVKLADPEIEDPPLCM
AVIEPQYTMSGNVEVLLGIGDACVLAVEEDGVQQLGLEVLRGPIQKMAVSRDGQWLASFT
HDGRLLVMTSNLNEILIEQECESALPPEQLAWCGMDTVLLYWDDILLMMGPRGDPVRYFY
DEPIILIPECDGVRILSNSSMEFLQRVPDSTESIFKIGSTSPAALLYDALDHFDRQSAKA
DENLRLIRPSLPEAVEACIDAAGHEFDVLRQRTLLRAASYGQAFCSNFQRDHIQEMCKTL
RVLNAVRHPDVGMPLSIQQYKLLTPSVLIGRLINSYKHFLALRVSEYLGMNQEMVIMHWA
CSKISASLAISDATLLEILLDKLKLCKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSKQ
VPLLLSIGEEDTALMKAIESGDTDLVYLVLFHIWRKRQPLEFFGMIQARALARDLFIIYA
RCYKHEFLKDFFLSTGQLQEVAFLLWKESWELGKNPMASRGSPLHGPRIKIIEKAQNLFL
ETKEYTFEAKAAEEHAKLLRMQHDLEVSTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIEADEKGEALKYIP
KLTDPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFSQNAAASSIFDTLRDRLSF
QGVS
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggccaatgtctcggttgccgcggagtggcagctcctctacaaccggtactaccggaag
cccgaaatctaccgaatgagctggaagcacgtggagctcaaccgcaacaaggtcgcctgc
gctcccttcggcggccccatcgccgtcatccgagacgattcaaagatcgtccaactcggc
ggagaatcggcgcaacgcaagctccgaatcttcagttcctcgggccatcttctcggcgag
accatctggaaacacccgggtggccgattaatcggcatggcctggaccgacgaccaaacc
ttagtctgcctcgtccaggacggcaccgttttccgctacaccatccacaccgagctcctc
gagccgagcatctccatgggccaagagtgcttcgagcgaaacgtcgtggactgcgtcttc
tggggaaacggcctcgtttgcatcaccgaaacgaatcagctgttttgcatttccgatttc
aagaacccgaacccggttaaattggcggacccggagatcgaggacccgcccctttgtatg
gcggtgatcgagcctcagtacacaatgtccgggaatgtggaggttctgcttgggattgga
gacgcttgcgtcttggctgtggaagaagatggcgttcagcagctagggcttgaggtgttg
cgtggaccaattcagaagatggcggtttcgagagatggacagtggcttgcttcgttcacg
cacgatggtcgattgttggtcatgacttcgaatttgaacgaaatcctaattgagcaggaa
tgtgagtcagctcttcctccggaacagttagcgtggtgtggaatggacacagtgttgctc
tattgggatgatattcttttgatgatgggtcctagaggagatcccgtgcgctacttttat
gatgaaccgataattcttattcctgagtgcgacggagtaaggatattatctaactcaagc
atggagtttctacaacgggtgcctgattccactgaatccatcttcaagattggaagtacg
tcacctgcggcattgttgtatgatgctttggatcattttgacagacaaagtgccaaggca
gatgagaatttgcgactaatacgcccatccttgccggaggctgttgaagcatgtattgat
gctgctggccatgaatttgatgttctacgtcaacggacgctcctaagagctgcaagctat
ggccaagccttttgcagcaattttcaacgggatcatattcaagagatgtgtaaaactttg
cgagttttaaatgctgtgcggcatcctgacgttggaatgcctcttagtattcaacaatac
aagttgcttacgccatctgttctgattggtcgtttgatcaattcctacaagcactttctt
gcactacgggtatcagagtaccttggaatgaaccaagagatggtgattatgcactgggca
tgttcgaagatttcagcttccttagcaatttctgatgccactcttcttgagatcttactt
gataagttgaaactatgcaaaggaatatcctatgcagcagttgctgcacatgcagataag
aatggccgccggaagttagctgctatgcttgttgaacatgaaccacgctcctccaaacag
gttcctctcttgttgagcataggagaggaagatacagctttaatgaaggcaattgaaagt
ggtgatacagaccttgtttatcttgttctctttcatatctggcgaaagagacaaccattg
gagttctttggaatgatacaagctagagcactggcacgtgatttgtttataatttatgca
cggtgctataagcatgaattcttgaaggactttttcctatcaactggacaacttcaagag
gtggctttccttttgtggaaagaatcttgggagcttggaaaaaatccaatggcaagcaga
ggatctccccttcatggtccacgcataaaaataattgagaaggcccaaaatcttttctta
gaaacgaaggaatatacctttgaggcgaaggctgctgaagagcatgcaaagttgttgaga
atgcagcatgacttagaagtgtcaacaaagcaggccatttttgttgattccagtatcagt
gatacaattcgaacatgtattgttctgggaaatcatcgagctgcaatgaaagtgaaaaca
gagttcaaggtttctgagaagagatggtattggctaaaagtttttgctttggctacaatc
agagattgggatgccttggagaagttctcaaaggaaaagagaccaccaattggttacaga
ccatttgtggaggcatgcatcgaagcagatgaaaaaggagaagcgttgaaatatatccca
aaactcacagatcctcgagaaagagcagagtcctacgctcggattggcatggccaaggaa
gctgctgatgctgcctcccaggcaaaggatggtgaattgcttggtcgactaaaattgact
ttttcacaaaatgctgcggcttcatcaatttttgatactcttagggaccggttatctttt
caaggcgtttcatag

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