Prunus dulcis (almond): 117620713
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Entry
117620713 CDS
T07328
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117620713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117620713
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117620713
Hops complex
117620713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Ank_2
Motif
Other DBs
NCBI-GeneID:
117620713
NCBI-ProteinID:
XP_034206770
LinkDB
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Position
3:16502723..16509670
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AA seq
844 aa
AA seq
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MANVSVAAEWQLLYNRYYRKPEIYRMSWKHVELNRNKVACAPFGGPIAVIRDDSKIVQLG
GESAQRKLRIFSSSGHLLGETIWKHPGGRLIGMAWTDDQTLVCLVQDGTVFRYTIHTELL
EPSISMGQECFERNVVDCVFWGNGLVCITETNQLFCISDFKNPNPVKLADPEIEDPPLCM
AVIEPQYTMSGNVEVLLGIGDACVLAVEEDGVQQLGLEVLRGPIQKMAVSRDGQWLASFT
HDGRLLVMTSNLNEILIEQECESALPPEQLAWCGMDTVLLYWDDILLMMGPRGDPVRYFY
DEPIILIPECDGVRILSNSSMEFLQRVPDSTESIFKIGSTSPAALLYDALDHFDRQSAKA
DENLRLIRPSLPEAVEACIDAAGHEFDVLRQRTLLRAASYGQAFCSNFQRDHIQEMCKTL
RVLNAVRHPDVGMPLSIQQYKLLTPSVLIGRLINSYKHFLALRVSEYLGMNQEMVIMHWA
CSKISASLAISDATLLEILLDKLKLCKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSKQ
VPLLLSIGEEDTALMKAIESGDTDLVYLVLFHIWRKRQPLEFFGMIQARALARDLFIIYA
RCYKHEFLKDFFLSTGQLQEVAFLLWKESWELGKNPMASRGSPLHGPRIKIIEKAQNLFL
ETKEYTFEAKAAEEHAKLLRMQHDLEVSTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIEADEKGEALKYIP
KLTDPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFSQNAAASSIFDTLRDRLSF
QGVS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgtctcggttgccgcggagtggcagctcctctacaaccggtactaccggaag
cccgaaatctaccgaatgagctggaagcacgtggagctcaaccgcaacaaggtcgcctgc
gctcccttcggcggccccatcgccgtcatccgagacgattcaaagatcgtccaactcggc
ggagaatcggcgcaacgcaagctccgaatcttcagttcctcgggccatcttctcggcgag
accatctggaaacacccgggtggccgattaatcggcatggcctggaccgacgaccaaacc
ttagtctgcctcgtccaggacggcaccgttttccgctacaccatccacaccgagctcctc
gagccgagcatctccatgggccaagagtgcttcgagcgaaacgtcgtggactgcgtcttc
tggggaaacggcctcgtttgcatcaccgaaacgaatcagctgttttgcatttccgatttc
aagaacccgaacccggttaaattggcggacccggagatcgaggacccgcccctttgtatg
gcggtgatcgagcctcagtacacaatgtccgggaatgtggaggttctgcttgggattgga
gacgcttgcgtcttggctgtggaagaagatggcgttcagcagctagggcttgaggtgttg
cgtggaccaattcagaagatggcggtttcgagagatggacagtggcttgcttcgttcacg
cacgatggtcgattgttggtcatgacttcgaatttgaacgaaatcctaattgagcaggaa
tgtgagtcagctcttcctccggaacagttagcgtggtgtggaatggacacagtgttgctc
tattgggatgatattcttttgatgatgggtcctagaggagatcccgtgcgctacttttat
gatgaaccgataattcttattcctgagtgcgacggagtaaggatattatctaactcaagc
atggagtttctacaacgggtgcctgattccactgaatccatcttcaagattggaagtacg
tcacctgcggcattgttgtatgatgctttggatcattttgacagacaaagtgccaaggca
gatgagaatttgcgactaatacgcccatccttgccggaggctgttgaagcatgtattgat
gctgctggccatgaatttgatgttctacgtcaacggacgctcctaagagctgcaagctat
ggccaagccttttgcagcaattttcaacgggatcatattcaagagatgtgtaaaactttg
cgagttttaaatgctgtgcggcatcctgacgttggaatgcctcttagtattcaacaatac
aagttgcttacgccatctgttctgattggtcgtttgatcaattcctacaagcactttctt
gcactacgggtatcagagtaccttggaatgaaccaagagatggtgattatgcactgggca
tgttcgaagatttcagcttccttagcaatttctgatgccactcttcttgagatcttactt
gataagttgaaactatgcaaaggaatatcctatgcagcagttgctgcacatgcagataag
aatggccgccggaagttagctgctatgcttgttgaacatgaaccacgctcctccaaacag
gttcctctcttgttgagcataggagaggaagatacagctttaatgaaggcaattgaaagt
ggtgatacagaccttgtttatcttgttctctttcatatctggcgaaagagacaaccattg
gagttctttggaatgatacaagctagagcactggcacgtgatttgtttataatttatgca
cggtgctataagcatgaattcttgaaggactttttcctatcaactggacaacttcaagag
gtggctttccttttgtggaaagaatcttgggagcttggaaaaaatccaatggcaagcaga
ggatctccccttcatggtccacgcataaaaataattgagaaggcccaaaatcttttctta
gaaacgaaggaatatacctttgaggcgaaggctgctgaagagcatgcaaagttgttgaga
atgcagcatgacttagaagtgtcaacaaagcaggccatttttgttgattccagtatcagt
gatacaattcgaacatgtattgttctgggaaatcatcgagctgcaatgaaagtgaaaaca
gagttcaaggtttctgagaagagatggtattggctaaaagtttttgctttggctacaatc
agagattgggatgccttggagaagttctcaaaggaaaagagaccaccaattggttacaga
ccatttgtggaggcatgcatcgaagcagatgaaaaaggagaagcgttgaaatatatccca
aaactcacagatcctcgagaaagagcagagtcctacgctcggattggcatggccaaggaa
gctgctgatgctgcctcccaggcaaaggatggtgaattgcttggtcgactaaaattgact
ttttcacaaaatgctgcggcttcatcaatttttgatactcttagggaccggttatctttt
caaggcgtttcatag
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