Prunus dulcis (almond): 117620781
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Entry
117620781 CDS
T07328
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117620781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117620781
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117620781
Complex C
U5 SnRNP specific factors
117620781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
117620781
NCBI-ProteinID:
XP_034206894
LinkDB
All DBs
Position
3:6305496..6316182
Genome browser
AA seq
2347 aa
AA seq
DB search
MWNNGQIAPPGTGGSSIPPPPAAQPSYTVLPSPADAEARLEEKARKWQQLNSKRYSDKRK
FGFVESQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVYLGALKFVPHAVYKLLENMPMPW
EQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFD
DEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLS
LPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDE
DWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMVMYIKTEDPDLPAFY
YDPLIHPIPSTNKERREKKTFDEEEDDVFGLPEGVGPFLQDTQLYTDTTAAGISLLFAPR
PFNMRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKK
KHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKT
LTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYTFSHVGQLT
GMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLE
RWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTI
LQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDK
TVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPP
LSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQR
AFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPP
LLVYKWCQGINNLQSVWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYV
TAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPN
EFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYN
NKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSM
CGFEVRILPKIRMSQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQIL
MSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMP
SRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNL
YRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRH
TLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHT
LFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVY
VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIET
VQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAEPKDVFDQKASNKYWIDVQLRW
GDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLQQ
AMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRV
TIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAAL
VRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILK
ATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTVITEPHHIW
PSLSDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAE
IEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQNAFGSKTDWRVRAISATNLYLRVN
HIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVKEIRCIAMA
PQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTTHAKILENTKQWDG
EKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFL
GFYMIPDTGPWNYNFMGVKHTPSMKYGIKLGTPREYYHEDHRPTHYLEFSNLEEGDTVEG
DRDDTFT
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacggccagattgcaccgcctggcaccggcggttcgtcgatcccgccaccg
ccggcggctcagccctcttacacggtattgccttccccagctgatgccgaggccaggctc
gaagagaaggcccggaaatggcagcagctcaattccaagcggtacagtgataagcgcaag
ttcggctttgtcgagtcgcagaaagaggacatgcctcctgaacatgtcaggaagatcatt
agagaccatggggacatgtcttcgaagaaatttcgtcatgataaacgagtgtatctagga
gcacttaaatttgttccacatgcagtctacaagctccttgagaatatgccaatgccttgg
gagcaggtccgtgatgtgaaggtcttgtatcatataaccggggcaattacatttgtgaat
gagataccctgggttgttgaacccatctatttggctcagtggggtacgatgtggattatg
atgagaagagagaagagggatcgtcgacatttcaaaagaatgcggtttccgccatttgat
gacgaagaacctccattagactatgctgataatctgttagatgttgatcccctagagcca
attcaactggagttagatgaagaagaagattccgctgtgtatacttggttttatgaccat
aaacctcttgttaagacaaagctcattaatggtccaagttatcggaagtggcatctttcg
cttccaatcatggcaacccttcatcgacttgcgggacagctactttctgatttgattgac
cgcaattatttttacttgtttgacatggagtccttttttacagccaaagcactgaatatg
tgcatccctggtggacctaaatttgaacctttgtatcgggatatggagaaaggggatgag
gactggaatgagttcaatgacattaataaactcattattcggtcacctctcagaacagag
tacagaattgcattccctcatctctacaacaatagacccaggaaggtaaagctttgtgtg
tatcacacacccatggtgatgtacataaaaaccgaggatcctgatctacctgcgttttat
tatgatccattgatacacccaatacccagcaccaacaaggagcggcgtgagaagaaaact
tttgatgaggaggaagatgatgtttttggtttaccggagggggtgggaccatttctgcaa
gatactcagctttatactgacaccacagctgctggaatctccctcttgtttgcgccacgc
ccttttaacatgagatctggtcggacacgtcgagcagaagatatacccctcgtgtcagag
tggtataaggaacattgtcctccgtcgtatccagttaaagttcgggtcagctatcagaaa
ttgctgaagtgttttgtgttgaatgagctacatcatagaccacctaaggctcaaaagaag
aaacatttgtttcgatctcttcaagctactaaatttttccagactacagagcttgattgg
gctgaagcgggtcttcaagtttgtaagcagggttataacatgctaaatctattgattcat
aggaaaaatttgaactaccttcatcttgattataattttaatctgaagcctgtgaaaaca
ctgacaacaaaagagcgtaagaaatctcggtttggtaatgcttttcatctttgccgtgaa
atcttgcggttgacaaagcttgtagttgatgctaatatccagttccgtttgggtaatgtt
gatgccttccaattggctgatggcttgcaatacacattttctcatgttgggcagttgact
ggaatgtaccgttacaagtataggttgatgcggcaaattagaatgtgcaaggatttgaag
catttgatttactatcggttcaatactgggccagttgggaaaggacccggatgcgggttc
tgggcaccaatgtggagggtgtggttgttcttccttcggggcatagttcctcttctagaa
cggtggttgggaaatttacttgcaaggcaatttgaagggcggcattcgaaaggagtggca
aagactgtaactaagcagcgtgtcgaaagccattttgacttggagcttcgagctgctgtc
atgcatgacgttcttgatgccatgccggagggcatcaagcaaaacaaggcaagaactatt
ttgcaacatctgagtgaggcgtggcgttgctggaaagcaaatattccttggaaggttcct
ggtttgccagttcctattgagaatatgattcttcgttatgtcaaatcaaaggcagactgg
tggacaaatgttgcccactataatcgcgagcgcataagaagaggtgctacagtagataag
acagtttgtcggaagaatcttggaagattaactcgcctttggctaaaggcagagcaggag
cgacagcacaattatctgaaagatggtccatatgttacacctgaagaggcagttgcaatc
tacacgacaaccgtgcactggttggagtcgagaaagttcagccccattccgttccctcca
ttgtcatacaaacatgatacaaagctacttatccttgctttggagaggctgaaggaatct
tatagcgtggctgtaagattgaaccagcttcaaagagaggagctgggtctcattgaacaa
gcctatgataatccacatgaggcattgtcacgaattaagcgtcacttgctcactcagcgt
gccttcaaagaagtcggtattgagttcatggatttgtatagctatcttattccagtttat
gagattgaacctcttgagaagattacggatgcatatcttgatcaatatttatggtatgag
ggtgacaaacgtcatctctttccaaactggatcaagcctgcagattctgagccacccccg
ctcttggtttataaatggtgtcagggaataaacaatttacagagcgtatgggacacaagt
gaggggcagtgtgtggtgatgcttcaaacgaagtttgagaagttctttgaaaagattgac
ttgacaatgctaaataggcttctacgtcttgtccttgatcataatattgctgattatgtc
actgcaaaaaacaacgtggtattgtcttacaaagatatgagtcatacaaattcttatggt
cttatacgtggtcttcagtttgcatcgtttgttgtacaatattatgggcttgtgttggat
ctgttgcttcttggattgactcgagccagtgagattgctggtccaccccaaatgccaaat
gagttcatcacttattgggacacaaaggttgagactcggcatcctatcaggctgtattct
cgatacatagacagggtgcatatcttgttccgcttcactcatgaagaggctcgggacctt
atccagcgatatctgactgagcatccagatcccaataatgaaaatatggttggatacaat
aataagaaatgctggccaagagatgctcgaatgaggctcatgaaacatgatgtcaatctt
gggaggagtgttttttgggatatgaagaaccgtcttcctcgaagtatcaccactttggag
tgggaaaacagctttgtttctgtttacagcaaggataatccaaatttgcttttcagcatg
tgtgggtttgaagttcgaatacttcccaagataagaatgagtcaagaagcatttagcaac
acgagagatggggtctggaatttgcagaatgaacagacaaaggagaggactgcagttgct
ttcttacgggttgatgatgaacacatgaaggtgtttgaaaatcgtgtgaggcagattctt
atgtcttcagggtctacaacatttacaaaaattgtcaacaaatggaatacagcacttatt
ggtcttatgacttatttccgtgaagcaactgtacatacacaagagctgttggatttgctg
gtcaagtgtgaaaataaaatacagacccgtattaagattgggttgaattcaaagatgcct
agcaggtttccgcctgtcattttctacacaccaaaagaaattggaggacttggtatgtta
tctatgggtcatatattgattccacaaagtgacctccgatacagtcagcagacggatgtt
ggtgtgactcactttaggagtggaatgagtcatgaagaggaccagctgattccaaatctt
taccgttacatacaaccatgggagagtgaatttatagattcacagcgtgtttgggcagaa
tatgcactgaaaaggcaggaagctcaggcacaaaataggcgtctaacgcttgaagatttg
gaagattcatgggataggggaattccacgaataaatactttgttccagaaggacaggcac
actttagcatatgacaaagggtggagagttcgcacagattttaagcagtaccaagtcttg
aaacagaatcctttctggtggacacaccagaggcatgatggaaaattatggaacttaaac
aactaccgaactgatgttattcaagcccttggaggtgttgagggaatccttgagcataca
ttattcaaaggaacatactttcctacttgggaggggctcttctgggagaaggcatctggt
tttgaagagtcgatgaagtataagaagttgaccaatgcacaaagatctgggctcaaccaa
atccccaatcgtaggtttactctttggtggtcacctaccataaatcgtgccaatgtttat
gtcggtttccaagtgcagctagatttaactggaatcttcatgcatggcaagattccgacc
ttgaagatttcactgattcagatattccgtgctcacttgtggcagaagattcatgaaagt
gttgtcatggatctctgtcaggttttggatcaagagttggatgcgttggaaattgaaaca
gtgcagaaggaaacaatacatcccaggaagagttacaaaatgaacagctcctgtgctgac
attcttctgtttgctgctcatagatggccaatgtcgaaacctagtctagtagctgagcca
aaggatgtgtttgatcagaaagctagcaacaagtactggatagatgtacaactccgttgg
ggtgactatgattcccatgatattgagcgttacacccgagctaagtttatggactatacc
actgacaacatgtctatctatccttctcccacaggggtgatgattggtctcgatttggct
tataatttgcattctgcatttggtaactggtttcctgggtcaaaacccttgctccagcaa
gcaatgaacaagatcatgaaatcaaatccagccttgtatgtgctgagggagcgaataagg
aaaggattgcagctctattcttcggagcccacggaaccatatttgtcatcccaaaactat
ggagagatcttcagcaaccaaattatttggtttgttgatgacacaaatgtttatcgtgtt
acgatacataaaacatttgaaggaaatctcacgacaaaacccatcaatggagctattttc
atattcaatccaaggactggtcagctgttcctgaaggttatccacacaagtgtctgggca
ggacagaagcgtcttggtcaattggccaagtggaaaactgctgaagaagttgctgcactt
gtgcgctctctgcctgttgaagaacagccgaagcaaattattgtgactcgtaagggaatg
ttggatccattggaggttcatttgcttgatttccccaacatagtcataaaaggaagtgag
ctgcagcttcctttccaggcttgtctgaagattgagaaatttggtgatctgatattgaag
gcaactgaaccgcagatggttctgttcaacatttatgatgattggttgaagagtatttca
tcatacactgcattctcccgactaattctgattcttcgtgcacttcatgtaaacaatgag
aaggcaaagatgttattgaagcctgataaaacagtcattactgagccacaccacatctgg
ccttctctttctgatgatcaatggatgaaggttgaggttgctctaagggatctcatatta
tctgactatgcaaaaaagaacaatgtgaatacatcggccttgacacaatccgagatccgt
gacattatacttggagctgagatcactccaccttctcaacaaaggcagcagattgcagag
atagaaaaacaggctaaagaagccagtcagctgacagcagtcacaacaaggactacgaat
gtgcatggtgatgaactcattgtcaccactacaagtccctatgagcaaaatgcttttggt
tccaaaacggattggcgtgtcagggcaatatcagccacaaatctatatcttcgtgtcaat
catatatatgtgaattcagaagatataaaggaaacgggttacacctatattatgccgaag
aacattttgaaaaaattcatctgcattgcggatctgaggacacaaattgctggttatttg
tatgggataagccctcctgacaaccctcaggttaaggagattcgttgcattgccatggca
ccacagtgggggacccatcagcaagttcatcttccatcagctcttcctgagcatgatttt
ctgaacgacttggaacctttgggatggatgcacacgcagccgaatgagcttcctcagctt
tctccacaggatctcaccactcacgcaaagattttagagaacaccaagcaatgggatggg
gagaaatgcatcatcttgacctgcagtttcactccaggttcctgctcgttaactgcatac
aaacttactccatctggttatgagtggggacgtgtcaacaaagacaccggaagcaatcct
cacggataccttcccacgcattatgagaaggtccagatgcttctcagtgaccgcttcctt
ggtttctatatgattccggacactgggccatggaactacaacttcatgggggtgaagcat
acgcctagcatgaagtatggcatcaagcttgggacccctagggagtactatcacgaggac
catcggccgacccattaccttgagttcagcaacttggaggagggtgacacagtggagggt
gatcgcgatgataccttcacgtaa
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integrated database retrieval system
