Prunus dulcis (almond): 117621033
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Entry
117621033 CDS
T07328
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdul03036
]
117621033
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117621033
REST complex
117621033
Heterochromatin formation proteins
Other heterochromatin formation proteins
117621033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
117621033
NCBI-ProteinID:
XP_034207184
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All DBs
Position
3:22471076..22480375
Genome browser
AA seq
1397 aa
AA seq
DB search
MKRVRDDLCSSFSAMKRPSGSSRGDSQSQVPGGGGGGGGVVVVGGGAMGGGGASQKLTTN
DALTYLKEVKEMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLILGFNT
FLPKGYEITLDEDETPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKEHKD
INEVYSEVAALFDEHPDLLDEFTRFLPDASAAASAHHAQYGRNSFPRFNERSSATPTFRP
MHMDKQRRRDRIIPSHADRDLSVDRPEQDDDKGMVKVQKEHRKRCEKENRDRRNRDDDDR
ELENDNNRDYKLQRFPEKRKSSRKVEGFGVTANFAPYDDKDSLKSMYSQGFIFCEKVKER
LCSQEDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYPDLMEEFNDFLERCENIDGFLA
GVMSRKSLNSDGQLSRSVKVEEKDKEQKREMEGAKEKERYREKYWAKSIQELDLSNCERC
TPSYRLLPEDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCED
DRFELDMLLESVSSTAKRAEELLNSINENKISMESPIHIEDHFTALNLRCIERLYGDHGL
DVMDILRKNPTLALPVVLTRLKQKQEEWTRCRSDFNKVWADIYAKNHYKSLDHRSFYFKQ
QDSKNLSSKSLVAEIKELKEKKQIEDDILLAVAAGNRQSVVPHVEYEYVDISIHEDLYKL
VQYSCEEVFSTKEQLNKAMRLYTTILEPMLGVPSRPHGSEDEEDADKTRNRTMNYTASSI
GESDGSPGGDTAMVNLKQPQSVCTEEENTLAEVESLANGDTLAKEDGSCDAERVRKNDSI
CDNIQLEKDQKNMDLSDKRYLVTTMDNGRLPSQPSYRIGAENKHGRTSLEVTSGCVASTS
RPGGSISDNDHLQKANADVVPSPEGVDIAKSASFANGVAPESTKVNSRHEVSVGPSKIEK
EEGELSPVGDFGEDNFVVSGDAGVQAMPKTNHNVESRQYQSGNGEDTCQDAGENDADADD
ENSENVSEAGEDASGSETAGDECSREEQGEEEDAEHDDVDGKAESEGEAEGVADGHLVGG
DGMSLQLSERFLLSVKPVAKHVPAALLEERKDSRVFYGNDNFYVLYRLHQILYERISSAK
TSSTGAEMKWRSSKDSSSPDLYARFMSALYSLLDGSADNAKFEDECRAIIGNQSYILFTL
DKLIYKFVKQLQAVAADEMDNKLLQLYEYEKSRKTEKLIDSVYYENARVLLHEENIYRLE
FFSAPSRLSIQLMDSVSEKPEVFAVSMEPNFASYLHNDFLPVFPGKKEPHGITLQRNKRK
YAGQDESSAFCRAMEDVQLVNGLECKIACNSSKISYVLDTEDYFFRMRRKRRNPSGARSP
YCDQLRVQRFHKFLSVS
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagtgagagatgatttgtgttcttccttctctgcaatgaaacgaccctctggt
tcttctcgcggggactcacaatcccaagtaccgggaggaggaggtggtggagggggcgtt
gtagtagttggaggaggggccatgggaggaggaggtgcttcacagaagttgacaaccaat
gacgctctaacgtatctcaaagaagttaaggaaatgtttcaagaccaaagagaaaaatat
gatatgtttcttgaggtcatgaaggatttcaaggctcaaagaactgacacagcaggtgtc
attgcaagagtaaaggaattatttaaagggcataacaacttaattttgggctttaatacc
ttcttgccgaagggttatgagataaccctcgatgaagatgagactccaccgaaaaagaca
gttgagtttgaagaagctatcagttttgtaaacaagataaagaaacgtttccaaaatgat
gatcatgtttataagtcattcctagatatacttaacatgtatcgaaaggagcacaaggac
ataaatgaggtttacagtgaggttgctgctctatttgatgagcatccagatttgcttgat
gagttcaccagatttttacctgatgcgtcagcagcagcttctgcacatcatgctcaatat
ggccgcaattcatttccgcgtttcaatgagcgcagctctgctacacccacatttcggcca
atgcatatggacaagcaacgtaggagggataggatcattccttcccatgctgatcgtgat
ctcagtgttgatcgtcctgagcaagatgatgacaaaggaatggtgaaagtgcagaaggag
caccgaaaacgttgtgaaaaggagaacagggataggagaaatcgggacgatgatgataga
gaattagagaatgataacaatagggactacaaattgcagcgttttcctgagaaaagaaag
tcatccaggaaggttgaaggttttggggtgactgctaactttgctccttatgatgacaaa
gactccttaaagagcatgtacagccagggattcattttctgtgagaaagtgaaggagagg
ttgtgcagtcaagaagactaccaagcatttttgaaatgccttcacatttatagcaatgga
ataattaaaaggaatgatctacagaatttggtgactgatttattgggaaagtatcctgat
cttatggaagaatttaatgattttttggagcgctgtgagaatatagatggtttccttgct
ggtgttatgagtagaaaatctctgaatagtgatggtcaattatccagatcggtgaaggta
gaggagaaagataaagagcaaaaacgtgaaatggagggagctaaagaaaaggaaagatac
agggagaagtattgggcaaaatctattcaagagctagatctctctaactgtgaacgttgt
actccaagctatcggcttctgcctgaagattatccaataccttcagcaagccaaagatca
gaacttggtgcccaggttttgaatgaccactgggtgtccgtgacttcaggaagtgaagac
tactcttttaaacatatgcgcagaaatcagtatgaagaaagtctgttcagatgtgaagat
gataggtttgagctggatatgttgttagagtcggtgagctcaactgctaagcgagcagag
gaacttctgaacagcattaatgaaaataagatcagtatggaaagtccaatccatatcgaa
gaccacttcactgctttaaacttaaggtgcattgaacgtttatatggtgaccatggtctt
gatgtgatggacatactgcggaaaaatccaactctggctttgcctgtcgtattaactcgc
ctaaagcagaaacaagaggaatggacaaggtgtagatcagattttaacaaggtttgggct
gatatatatgcgaaaaaccattacaaatcacttgatcacaggagcttctatttcaagcaa
caagattcaaagaacttgagtagcaaatctttggtagctgagatcaaggaattgaaagag
aaaaagcagatagaggatgatatccttctggctgttgctgctggaaacaggcaatctgta
gttccacatgtggagtatgaatacgttgatatcagcatacatgaagacttgtataaactt
gtccaatattcttgcgaggaggttttctcaacgaaagaacagctaaataaggccatgaga
ctttatactacgattttggagccaatgctgggtgttccttctcgacctcatggttcagag
gatgaagaagatgctgataaaactaggaatcgtactatgaattatactgcatcaagcata
ggagaaagtgatggaagtcctggtggggatactgctatggtgaatctcaaacagcctcaa
tctgtgtgtactgaagaagaaaatactttagcagaagtggaaagcttggctaatggggat
accttagctaaagaagatggtagttgcgatgcagagcgtgtccgtaagaatgattccata
tgtgataatattcaactagagaaagaccagaagaatatggatctctctgataaaaggtat
ctggttaccaccatggataacggacggctacccagtcaaccatcatatcgaattggagca
gaaaataagcatggcagaaccagcttggaagtgacatcagggtgtgttgcatccacgtca
agacctggtggctccattagtgacaatgaccatttacagaaagcaaatgctgatgtcgtt
ccttcaccagagggcgttgatattgcaaaatccgcttcatttgctaatggagtggctcca
gaaagcactaaagttaacagtcgtcatgaagtgtccgttgggccctccaaaattgaaaaa
gaagagggggagttatcaccagttggtgattttggggaggataactttgttgtctctgga
gatgctggggtgcaagctatgcctaagaccaaccataatgtagaaagtagacaatatcaa
tctgggaatggggaagacacttgtcaggatgctggagaaaatgatgcagatgctgatgat
gagaacagtgaaaatgtttctgaggctggcgaagatgcctctggcagtgagacagctggt
gatgaatgttctcgggaagagcaaggtgaagaggaagatgctgagcatgatgatgttgat
ggtaaggctgagagtgaaggtgaggctgaaggggtggctgatgggcaccttgttggagga
gatggaatgtccttgcaattgtcagaacgttttcttttgtctgtgaagcctgttgcaaag
catgtgccagctgctttacttgaagaaaggaaagactctcgtgttttctacgggaatgat
aatttctatgtgctttataggcttcatcaaattctatatgaaaggatttcatctgcaaaa
acaagttcaacaggtgcagaaatgaagtggagaagttcaaaggatagcagttctccggat
ctgtatgccagatttatgagtgctctatacagtttgcttgatggatctgctgataatgca
aaatttgaggatgaatgccgagcaattattgggaaccagtcgtatatattattcacattg
gacaaattaatatataaatttgtcaaacagcttcaagccgttgcagctgatgagatggac
aataagcttcttcaattatatgaatatgaaaaatcccgcaaaactgagaagttgatagat
tctgtttattatgaaaatgcacgtgtcctccttcatgaggagaacatttacagattggaa
tttttttcagccccctcccggctgtccatccagctgatggacagtgtgagtgaaaagccc
gaggtgtttgccgtttctatggaacctaattttgcatcttatctacacaatgattttctg
ccagtttttcctggaaaaaaggagccgcatggcattactcttcagagaaacaagcgcaaa
tatgcagggcaggatgaatcctctgctttctgcagggccatggaggatgttcagttggtc
aatggtttagagtgcaagatagcgtgcaactcatccaagatctcttatgttctggacaca
gaagattacttcttccgtatgagaaggaaaaggagaaatccatctggggccagatcaccg
tactgtgatcagttgagagtacagcggttccacaaattcttatcagtctcataa
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