KEGG   Prunus dulcis (almond): 117621097
Entry
117621097         CDS       T07328                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03010  Ribosome
pdul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    117621097
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117621097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pdul03011]
    117621097
   04121 Ubiquitin system [BR:pdul04121]
    117621097
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdul04147]
    117621097
Ribosome [BR:pdul03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    117621097
  Archaea
    117621097
Ubiquitin system [BR:pdul04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   117621097
Exosome [BR:pdul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117621097
  Exosomal proteins of colorectal cancer cells
   117621097
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD DUF2604 UBL_UBAC1 Fer2_3 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 117621097
NCBI-ProteinID: XP_034207278
LinkDB
Position
3:309038..309830
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaaaaccctaacggggaagactataaccctagaggttgagtcttcc
gacaccatcgacaatgtgaaagccaagatccaagacaaggagggcatccccccagaccag
caacgtctcatcttcgcagggaagcagctcgaggacggccgaaccctagctgactacaac
atccagaaggaatcgactctgcacctggtgcttcgtctccgtggtggagccaagaagcgt
aagaagaagacctacaccaagcccaagaagatcaagcacaagaagaagaaggtcaagctc
gccgtcctccagttctataaggtcgacgattctggaaaggtccagaggctcaggaaggag
tgccccaatgctgagtgcggcgccgggactttcatggccaaccatttcgacaggcactac
tgtggtaagtgcggcctcacctatgtctatcaaaaggctggcggcgactga

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