KEGG   Prunus dulcis (almond): 117621223
Entry
117621223         CDS       T07328                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117621223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117621223
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117621223
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 117621223
NCBI-ProteinID: XP_034207460
LinkDB
Position
3:complement(22736294..22744804)
AA seq 1695 aa
MGVHGLWELLAPVGRRVSVETLAGRRLAIDASIWMVQFMKAMRDEKGEMVRNAHVLGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQSKLRKTAEKLLLNHLKAMKLK
VLAEDIKNQRQNQKNDAKGKQSLPDQTGRMGDDNLEKNDMALLSSNQEKLDEMLAASIQA
EEEGGLAKNASKFTAAVPCEEDSEEDDEEMILPEMNGEVDPAVLANLPPSMQLGLLLQSN
KQDNEAKGKKIMSDQTEMVGINLENCEVVSRSCNQEKLDEMIAASIAAEEDAGATNNAST
STASIIVEEDVDEDGDDDEEMILPEMHGKVDPAVLAALPPSMQLDLLVQIRERLMAENRQ
KYQKVKKDPGKFSELQIQSYLKTVAFRREIDQVQKAAAGRGVSGVHSSRIASEAHREFIF
SSSFTGDKQVLASARADKNGDKQQAPKEHPSNFRNSVPSTNNVTGATPDESTSVFDDNIE
TYLDERGHLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKTNTNKIINTRNLLNERDIDIS
KSSCSSRKFIETSCGDNVDSIDTGVLRSHPGQKKVLESSVGDNSLNDRNNQCTLKLETPI
EISIEDGGESKSFDGDDDLFASLVAGNAVTTNANDILRKQSSGSDSDCDWEEGTVEVKSK
VPCVEGNMSDDSEVEWEEGVCGITENTSSFPHECGKTVSKGYFEEEANFQEAIRRSLEDI
GDEKCAYASSAEEKLQSFGGEAHKGAEFIDRETKIVEAVLVGKIGKRQNESSCDIVDGVK
KMKSVTDLDSPPAQTIQNVSERENFCGGMQCAESVTPSGTKEVHMITEQVLGTFNEDDSL
STLPNTLEKNKAHSFDALSCDATNWVDDQKNEIEAEPSCHIVEMANPAALTGSLTEKLTN
DCDVDKTWVKEKSHDNFFQESEHSWDKSSLNSDANARVEATEANLEEEMLILGQECTNLG
DEQRRLERNVESVSSEMFTECQELLQMFGIPYIIAPMEAEAQCAYMELTNLVDGVVTDDS
DVFLFGAQSVYKNIFDDRKYVETYFMKDVEKELGLSREKLIRMALLLGSDYTEGVSGIGI
VNAIEVVNAFPEEDGLHKFRDWIESPDPTILGKFDGETGSSAKKRGSKFGDKDINSQSNK
EEVSAFDQNNCPGQEHKQSADLIEEIKQTFMDKHRKVSKNWHIPSSFPSEAVSVAYTCPQ
VDKSTEPFTWGKPDHFVLRKLCWEKFGWGTQKADELLIPVLKEYVKRETQLRLEAFYTFN
ERFARIRSKRIKKAVKGIAGNQSSELIDDAAQEVSRSRKKGSISTDEPGGDKSEKLSEGT
EKGVFRDQRNSKGKSTIKQLRKRRTTEVPVPSDRPKPAEMARTTNRRLHANGKGRGRGRK
VLGRGKGKENPSAEASETSSSKGDDDDDDGMDLHMETVEGSGEVRRSGRLRKPVNYRVND
LENDDVDDPLDHCDTKCSNEESGEQLLSWDEGKCEEGSSRFSEKKQQNAGNLSPNAGLCN
DYLETGGGFCLVEDETGELAGGGFCPVEDETGELAGGGFCPDEDETGELGLSQHHDPSFE
AEVSEDYLKMGGRLCRDGQIGNDRDEIGVQATAAASEDSDLPNFSGYVNKVDFGNASVQS
SVGTKRPLQGFEGCERTGAYDAEQSINDEIASKNDDHSKLSVLLQENTVDNSGQPSVGVG
ALSAMPFLRKKRRQT
NT seq 5088 nt   +upstreamnt  +downstreamnt
atgggcgtccacggtctatgggaactactggcccccgtcggccgccgcgtgtccgtcgaa
accctagccggaagaagactcgccatcgatgcgagcatatggatggtgcagtttatgaag
gcaatgcgggacgagaagggagagatggttcgcaacgcgcatgtactcggcttctttcgt
cgaatttgcaagctactgtacctgcggaccaagcccgtctttgtattcgatggcggaacc
ccagccctcaagcgccgcactgtgatcgctcgaagaagacagcgggagaacgcccagtcc
aagcttcgcaagactgccgagaaattgcttctcaatcatcttaaggctatgaagctgaaa
gtcttggctgaggatattaagaaccagaggcagaatcaaaagaatgatgccaagggtaag
caaagtctaccagatcaaactggtaggatgggagatgataatttagaaaaaaatgatatg
gccttgctgagtagcaaccaggaaaagctggatgaaatgttggcagcatctattcaggcc
gaggaagaagggggtttagcaaagaatgcatcaaaatttactgccgctgttccttgtgag
gaggatagcgaagaagatgatgaagagatgatactaccagagatgaacggtgaagttgat
ccagctgtattagctaatttgcctccatccatgcaacttggacttcttttgcaatcaaat
aagcaggataatgaggctaagggtaagaagattatgtcagatcaaactgagatggtggga
atcaatttagaaaactgcgaagtggtctcaaggagttgcaatcaagaaaagctagatgaa
atgattgctgcatctattgcggcagaggaggatgctggtgcaactaataacgcgtcaaca
tcaactgcttctattattgttgaggaggatgttgatgaagatggcgatgatgatgaagag
atgatactgccagaaatgcatggtaaagttgatccagctgtattagctgcattgccccca
tcaatgcaactcgatcttcttgttcaaattagagagaggttgatggcagaaaaccgacaa
aagtatcaaaaagtcaaaaaggatcctggaaagttctctgagctacaaatacaatcttat
cttaaaactgttgctttccgtcgcgagatagatcaagtacagaaagctgctgctgggagg
ggggttagtggtgtccatagctcacggatagcctctgaggctcacagagagtttatcttt
tcttcatcatttactggtgataaacaagtacttgcatctgcaagagctgataaaaatgga
gataagcaacaagcaccaaaagagcatccttcaaatttcaggaacagtgttccgtctaca
aataatgtgactggagcaaccccagacgaatccacaagtgtttttgatgacaacattgag
acatatttggatgagaggggccatcttcgagtcagtagagtgagagctatggggatccgt
atgacccgtgatttacaaaggaacttggatttgatgaaggagattgaacaggagaaaaca
aatacaaacaagataatcaacactaggaatttgctcaatgaaagagacattgacatttca
aaaagttcttgtagtagtagaaaattcatagaaacatcatgcggtgataatgttgattcc
attgacactggtgtgttgagaagtcatcctggtcaaaagaaggttttggaatcctcagtt
ggtgataatagcttgaatgacagaaataatcagtgtacattaaaacttgaaactcctata
gaaatatctattgaagacggtggggagagcaagtcttttgatggtgatgatgatcttttt
gcttctttagtggcaggaaatgctgtaactactaatgctaatgatatattaagaaaacaa
tcttctggttctgattcagactgtgactgggaggaaggaactgttgaagtgaaaagtaag
gtgccttgtgtggaaggcaacatgagcgatgacagtgaagtggaatgggaggaaggagtt
tgtggtattacagaaaatacctcatcttttcctcatgagtgtgggaaaacagtttccaaa
ggttattttgaagaagaggctaattttcaggaggcaataaggagaagtcttgaggatatt
ggggatgagaagtgtgcttatgcatcatctgcagaggaaaagttgcaatcttttggagga
gaggctcataaaggtgctgaatttattgatagagaaactaagatagttgaggcagttttg
gtcgggaaaattggtaagcgacaaaatgaatcatcttgcgatattgttgatggagtcaaa
aagatgaaaagcgttacagacttggattctcctccagcacaaacaatacagaatgtaagt
gaaagggaaaatttctgtggaggaatgcaatgcgctgaatctgttactccgtcaggaaca
aaggaggtccatatgattactgaacaagtcttgggtactttcaatgaggatgacagttta
tctaccttgcccaataccttagaaaaaaataaagctcattcttttgatgccttgtcttgt
gatgctaccaattgggttgatgatcagaagaatgaaattgaagctgagccatcatgtcat
atagttgagatggctaacccagctgccttaacggggtcgttgacagaaaaactaacaaat
gattgtgatgttgataaaacatgggttaaggaaaagagtcatgacaatttttttcaggaa
agtgagcacagttgggacaaatcttcactcaacagtgatgcgaatgcacgtgttgaagcc
acagaggctaatttggaggaggaaatgctaattctcggccaagaatgtacgaatctggga
gatgagcagagaaggcttgaacgtaatgtagaatcagtcagcagtgagatgttcactgaa
tgtcaggagctactgcaaatgttcggtataccctacattattgcgccgatggaagcagaa
gcccaatgtgcatatatggaacttacaaaccttgttgatggtgttgtgactgatgactcc
gatgtgttcttgtttggggcgcaaagtgtgtacaaaaatatatttgacgatcgtaaatat
gttgagacatatttcatgaaggacgttgagaaggagcttggcctaagcagagagaagtta
attcgtatggcacttcttcttggaagtgattatactgaaggagttagtgggatcggcatt
gtcaatgctattgaagttgtaaatgcatttcctgaggaggatggcctccataaattccgg
gattggattgaatcaccagatcctaccattctagggaagtttgatggtgaaacgggatca
agtgcaaagaaaagggggtctaagtttggggataaggatatcaattcacagagcaacaag
gaagaagtctctgcatttgaccaaaataattgtcccggtcaagagcacaagcagtcagct
gatcttattgaagaaataaagcaaactttcatggataagcataggaaagtgagcaaaaat
tggcatattccctcctcttttccaagtgaagcagttagtgttgcttatacttgtccacag
gtggacaaatcaactgagcccttcacatggggaaagccagatcattttgttcttcgcaaa
ttatgttgggaaaagtttggttggggtacccagaaggcagatgaattgctaatacccgtt
ctgaaggagtacgtcaaacgcgagactcaactgcggctggaagctttttacacgtttaat
gaaagatttgcaagaattcgtagtaagagaatcaagaaagctgttaaaggtatcgctgga
aatcaatcttcagaattgatagatgatgctgctcaagaagtttctagaagtagaaagaag
ggaagcataagtactgatgaacctgggggtgacaaatcagagaaactgtcagagggaaca
gagaaaggtgtttttagagatcagagaaattctaaaggaaagtcaactattaagcagttg
aggaaaaggaggaccactgaagtgcctgttccatctgaccgaccaaagcctgctgaaatg
gcacgaacaactaatagaagattgcatgcaaatggaaaaggcagaggaagaggtaggaag
gtattgggaagaggaaagggaaaagaaaatcccagtgctgaagcatctgaaaccagctct
agtaagggtgatgatgatgatgatgatgggatggaccttcatatggagacagtagaaggg
tccggagaagtgcgcaggtcggggcgtttgcggaagcctgtaaattacagagtcaatgac
ttagaaaatgatgatgttgatgatccactagatcactgtgatacaaaatgttccaatgaa
gagtcaggggaacaacttctttcctgggacgaaggtaaatgcgaggaaggttcttctcgt
ttcagtgagaagaaacagcagaatgcagggaacttgtctcctaatgcgggcctgtgtaac
gattatcttgaaacgggaggtgggttctgccttgttgaagatgaaactggtgaacttgca
ggaggtgggttctgccctgttgaagatgaaactggtgaacttgcaggaggtgggttctgc
cctgatgaagatgaaactggtgaacttggtctcagccaacaccatgatccttctttcgag
gctgaggtttctgaagactaccttaagatgggagggaggctttgcagagatggtcagatt
ggtaatgaccgagatgaaattggtgtacaagctacagctgctgcctctgaagattccgac
cttcccaatttctccggctatgtcaataaagttgattttggtaatgcttcagttcaatcc
agcgttggcaccaaaagacctttacaaggatttgaaggttgtgaaaggacaggtgcatat
gatgctgaacaaagtataaatgatgaaatagcttcaaagaatgacgatcattcgaagttg
agcgtgttactgcaggaaaatactgtagataattctggacagccatccgtaggggtagga
gctctaagtgcaatgcctttcctcaggaaaaaaaggcggcagacctga

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