Prunus dulcis (almond): 117621291
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Entry
117621291 CDS
T07328
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117621291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117621291
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117621291
Complex C
U5 SnRNP specific factors
117621291
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Nbas_N
RMC1_N
DUF5074
Motif
Other DBs
NCBI-GeneID:
117621291
NCBI-ProteinID:
XP_034207574
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All DBs
Position
1:5105490..5109344
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AA seq
344 aa
AA seq
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MMQFAPSEGETALSVVGPRPMELSTHSARPAPGPNGKQRTSSLESPIMLLTGHQSAIYTM
KFNPTGTVVASGSHDKEIFLWNVHGECKNFMVLKGHKNAVLDLHWTTDGSQIISASPDKT
VGAWDVETGKRIKKMAEHSSFVNSCHPARRGPPLIVSGSDDGTAKLWDMRLRGAIQTFPD
KYQITAVSFSDASDKIFTGGIDNDIKVWDLRKAEVMMTLQGHQDMITGMSLSPDGSYLLT
NGMDCKLCIWDMRPYAPQNRCVKIMEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYVW
DTTSRRILYMLPGHTGSVNESVFHPNEPIIGSCGSDKQIYLGEI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatttgctccaagtgagggtgaaactgctttgtccgtagttggtccaaggcca
atggagttgtctacgcatagtgctcgcccagcacctgggccaaatggaaaacaaaggact
tccagtttggaatcaccaatcatgttgttgacaggtcatcagagtgctatatacacaatg
aaatttaatcctactggaacagttgttgcctctgggtctcatgacaaagaaattttctta
tggaatgttcatggggaatgcaagaactttatggttctgaaggggcacaagaatgctgta
ttggatcttcactggacaactgatgggtctcagataatatcagcaagtccagacaagact
gtgggggcatgggatgttgaaacaggaaaaagaataaaaaagatggcagaacactcatca
tttgtgaattcttgccatcctgctcgaaggggaccacctcttattgtcagtggatctgat
gatggaactgccaaactatgggatatgcgtctgaggggtgccatccaaacatttcctgat
aaatatcaaattacagctgtcagcttctctgatgcatcagataaaatctttaccggaggg
attgacaatgatattaaagtttgggatttgcgcaaggctgaagtaatgatgacgcttcaa
ggccatcaagatatgataacaggtatgtcattgagtcccgatggctcttatcttctgact
aatggaatggactgcaagctctgcatttgggatatgcgcccgtatgcaccacagaatcgt
tgtgtgaagataatggaagggcaccagcacaattttgaaaagaacttgttgaaatgtggc
tggtcccctgatggaagcaaggtcacggctggaagttctgatcggatggtttacgtttgg
gatactacttctcgacgcatcttgtatatgcttcctggccacaccggatctgtcaatgag
tctgtattccatcccaatgaacccattattggatcttgcggtagtgataaacagatctat
ctgggggaaatctga
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