Prunus dulcis (almond): 117621461
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Entry
117621461 CDS
T07328
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdul03036
]
117621461
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117621461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
117621461
NCBI-ProteinID:
XP_034207842
LinkDB
All DBs
Position
3:21505287..21517834
Genome browser
AA seq
1808 aa
AA seq
DB search
MSYPVTSSSSSGSAHWGISLSNTVHSEVAPCLPLPSLPVFCGASDQDLRLFDEPSRNSAW
LNHPDAALSSRIADLLRETDVSYLNLREDSSLVPYGYIEPLKLHDEVLQFNPEAFEYNSP
GPIKGQVPGSSTVPDKKPFKPSVPITRLAQRDYGATNNNQLNDIPPNDVSTPSSRKPKAK
KKDTDVVMSSVGPDQTAIQDAIIGRFCELVEDFCGRAELFSDDREEAEWLSIPLSDLRVL
ANEIMSLRAKRLLHLVPVDSFVRLLRILDHQIHRAEGLSISECEQSNSDVVSSINCALES
IHAALAVMAHNQMPKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHRPSQNGSLEVE
EDEDPDAEIGSASKKRRSIKTVKVHKSSFNRVSAAVNNILQKMCTILGLLKDLLLIERLS
DGCILQLVKTSFTTFMVDNIQLLQLKAMGLISGIFYSYTQHRTYVIDELIQLLWKLPFSK
RALRAYHLPDEEQRQIQMITALLIQLVHYSANLPEPLRQESSGNSILELSLDADYPTKGH
EAATEACCHFWTRVLQRFASAKAQEASELKVMMENLVTDLLTTLNLPEYPASAPILEVLC
VLLLQNAGLKSKDIGARTMAIDLLGTIAARLKRDSALCIKDKFWILQELVSVDGNDQTDP
KNACSVCLDGRVEKNFFVCQGCQRMFHADCMGVREYEVPNRSWHCQICLCRKQLLVLQSY
CNSQCKDDGTKDRNRSGRNTEVAFSITKLEVVQQMLLNYLQDAASADDGHLFVRWFYLLL
WYKDDPKSQQKFMYYLARLKSKEIVRDSGTVFSLLTRDSVKKITLALGQKNSFSRGFDKI
LHLLLASLMENSPVIRAKALRAVSIIVEADPQVLGDKRVQSAVEGRFCDSAISVREAALE
LVGRHIASHPDVGLKYFEKVAERIKDTGVSVRKRSIKIIRDMCVSNANFSEFTKACIAII
SRIGDDESSIQDIVCKTFYEFWFEEPTGSQTQFFGDGSSVPLEVAKKTEQIVEMLRRMPS
HQLLVTVIKRNLALDFFPQSAKAIGINPVSLASVRKRCELMCKCLLERILQVEEMNIQEG
ERRTLPYVLALHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQADSRVIAQLVESIIFIID
AVLPFVRKLPQSVVEELEQDLKNMILRHSFLTVVHACIKCLCAVSKVAGKGAAIVENLIQ
LFFKRLDAQAVDNKQQVGRSLFCLGLLIRYGNCLASNSDKTSDVVSSLSLFKKYLLVEDF
VIKVRSLQALGFVLIARPEYMLEKDIGKILEATFSSSSDVRLKMQALQNMYEYLLDAESQ
MGTDAASNNVIQYSVEGGNAVSVAAGAGDTNICGGIVQLYWDNMLARCLDLNEQVRQSAL
KIVEVVLRQGLVHPITCVPYLIALETDPLESNSKLAHHLLMNMNEKYPAFFESRLGDGLQ
MSFTFIQSVTTSSERENTKVPTKASGNAKGKCDSISLAQARVGVSRIYKLIRANRASRNK
FMSSIVRKFDNTSWTTSVVPFLMYCTEILALLPFTTPDEPLYLVFSINRVIQVRAGALEA
KLKALTLHLLQRGAPHGNGIIEEDPTAQPFQRGTTLVDLNGTIQQEPVFQPVTNYMPTMQ
WNGVIQHEPADQSVSNQATPFGANMYSTGSGSSHGFSKDDEQKIQADCLAAIALQLLLKL
KRHLKIVYSLNDARCQAFSPADPLKPGDVLSRQNIPFDLSETHTTLPTTHQELVQRYQEF
KNALREDTVDYSTYTANIKRKRPAPRKGRKSVGGDDDGDDDDEDWTGGPRRLSNSGRRGN
YSRSRQRL
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccagtcacttccagttcgagctccggctcggctcactggggcatcagcctc
tcgaacacggtgcactcggaagtcgctccatgcttgcctttgccttcgcttccggtgttc
tgcggcgcatctgatcaggacctacggctgttcgacgagccgagtcgaaacagtgcgtgg
ttgaatcaccctgacgcagctctttccagtaggattgctgatctgcttcgagaaactgac
gtctcttacttgaaccttcgagaagattctagcttagttccatatggttatatcgaacct
ttaaaacttcatgatgaagttcttcagttcaatccagaagcatttgagtacaatagtcca
ggtcctattaaggggcaagtgcctggcagtagtacagtacctgacaagaagcccttcaag
cccagtgtacctataaccagacttgcccaaagagactatggtgcaactaacaataatcag
ctcaatgatattcctcctaatgacgtatctacaccatcttctaggaaaccaaaagccaag
aaaaaagatactgatgtcgttatgtcatcagtcggaccagatcagactgcaattcaagac
gccatcattggacgcttttgtgagttggtggaggatttctgcggtagagctgaacttttc
agtgatgatcgggaagaagctgagtggttatctattcctctttctgatcttagagtgctt
gcaaatgaaataatgtctcttcgagcaaagaggcttctacatttggtccctgtagattct
tttgttagattgttaaggattttagatcatcagatacatcgagctgaaggcttgtctata
agtgaatgtgagcagtcaaattcagatgtggtttcatcaataaattgtgcactagagtcc
attcatgcagctttagcagtaatggctcataaccagatgccaaaacaactatataaagaa
gagatcattgaaagaattctggagttttctaggcatcagataatggatgttatgtgtgct
tatgatccatcatatcgtgctttgcataggccaagtcaaaatgggtcccttgaagttgag
gaagatgaagaccctgatgctgaaattggttcagcaagcaagaaacgacgcagcatcaag
accgttaaagtgcataaatcgtcatttaacagggtctctgctgctgtgaataatattctt
cagaaaatgtgcaccattcttggtttactcaaggatttgttgttaatagaaaggttgtca
gatggttgcatcttacagctagtgaaaacaagctttacaacattcatggtggataatatc
cagctcttgcaactgaaggcaatgggtttaatcagtgggatattctattcatacactcag
catcggacttatgtgatagatgaattaattcagctgctttggaagttaccgttctcgaag
cgagctttgagagcctatcacctacctgatgaagagcaaaggcagattcaaatgatcact
gctttgctgattcagttggttcactatagtgcaaaccttcctgaaccgttaaggcaggaa
tcaagtggtaattccatcttagaactttctctcgatgctgattatccaactaaaggccat
gaggcagcaacagaggcgtgttgccacttttggactcgtgtacttcagcgttttgctagt
gcgaaggctcaggaagcttcagagttgaaagtaatgatggagaatcttgttactgatctg
ctgacaacgttgaatttacctgaatatcctgcttcagctcctattctggaggttctttgt
gtcttgttactccagaatgccgggctgaaatctaaagacataggtgcacgtaccatggcg
attgaccttcttggcacaattgctgcgaggttgaagcgtgattctgccctttgcattaag
gacaaattttggatactacaggagttggttagtgtggatgggaatgatcagactgatcca
aaaaatgcatgctcagtttgtttagatggtagggttgaaaaaaatttctttgtatgtcaa
ggttgtcagagaatgtttcatgctgattgcatgggagtaagagaatatgaagttccaaat
cgaagttggcactgtcagatatgcctctgcaggaagcaacttcttgttttacaatcttac
tgtaattcacaatgcaaagatgatgggacaaaagatcgtaatcgttcaggaagaaacact
gaagttgctttttctattacaaaacttgaggttgtccagcagatgcttttgaattacctt
caagatgccgcatcagctgatgatgggcatctctttgttcgctggttttatctcttgttg
tggtacaaggatgatccaaaatcacagcagaagttcatgtactatcttgctagactgaaa
tcaaaagaaatagtgcgggattctgggactgttttttcattattgacaagggattcagtc
aagaagattactttagcattgggacaaaaaaactctttttccagagggtttgataagatt
cttcatttgcttctggcaagtttaatggagaattcacctgtaattagggccaaggcttta
cgagcggtcagtataattgtagaagctgatccgcaggtgctaggagacaaacgcgttcaa
tcggctgttgaaggaaggttttgtgattccgcaatttctgtcagagaagcagcactggaa
cttgtagggaggcatattgcttctcatcctgatgttggtttgaagtattttgagaaggtt
gctgagagaatcaaagatactggagtaagtgttagaaaacgatctatcaaaatcatacga
gatatgtgcgtttcaaatgcaaacttctccgaatttacaaaagcttgcattgctatcatc
tcccgtattggtgatgatgaatcaagtatacaggatattgtttgcaagacattttatgag
ttctggtttgaggaacctactggttcacaaactcagttctttggagatggtagctctgtt
ccattggaggtggctaaaaaaactgaacagattgttgagatgttgaggaggatgccaagt
catcaacttcttgtgactgtcattaaacgcaacttagcccttgatttttttccccaatca
gctaaagctattgggataaaccctgtctcacttgcatctgtacgcaagcgctgtgagtta
atgtgcaagtgcttactggaaaggatattgcaggtagaggaaatgaatatccaggaagga
gagaggcggacccttccatatgtgctagctttgcatgcattctgtgttgtggatccaaca
ctttgtgcaccagcttctgacccttcccagtttgtggttactcttcagccttatctaaag
agtcaggctgatagtcgagtgattgcacagttagtggagagcataatctttataattgat
gctgttctgccttttgttcgaaagttaccacaaagtgttgttgaagaacttgaacaagac
ttaaagaacatgattcttcggcattccttcttgacagttgttcatgcttgcatcaagtgc
ctctgtgctgtgagtaaagtggcaggaaaaggtgctgctatagtggagaatcttattcag
ctgttcttcaaacgtttggatgctcaggcagtagataacaagcagcaagtggggcggtct
cttttctgtcttggattgctcatccgttatggcaactgtttggcaagtaactctgacaaa
acaagtgatgttgtaagcagtctcagcttgtttaaaaaatatcttctagtggaggatttt
gtcataaaggttcggtcattacaggcattgggctttgttctaatagctcggcctgaatat
atgttggaaaaagatatcgggaaaatattagaggcaacattctcttctagctctgatgtt
cgtcttaagatgcaagcgttgcaaaacatgtacgaatatctccttgatgccgaaagtcaa
atgggaacagatgcagccagtaataatgtgattcaatattctgtggaaggtggcaatgct
gtatctgttgctgcaggtgctggggatactaatatctgtggtggtatagttcagttgtat
tgggataatatgttagcgagatgtttggaccttaatgaacaagttcgccaatctgcactt
aagattgttgaagttgtgctgcgccaaggccttgtgcatcctattacttgtgttccatac
cttattgcactcgaaacagatcctctggagagcaattcaaaattagcacatcatttgctg
atgaatatgaatgaaaagtaccctgcattttttgaaagccgcctgggggatggccttcaa
atgtcgtttactttcatacagtccgttactaccagttctgaacgggagaacacaaaagtt
ccaacaaaggcttcgggaaatgcaaagggaaaatgtgatagtatttctcttgctcaagca
agagtgggggtttctcgaatctataagcttattcgtgctaaccgggcttcgaggaacaaa
tttatgtcttcgattgttcgcaaatttgataatactagctggacaacttcagtcgtcccg
ttcctaatgtactgcacagaaatacttgccttgctaccgttcacaacacctgacgagccg
ctttatttggtcttttctataaatagagtaatacaagttagggctggagcgcttgaagca
aaactgaaagctctaaccttgcatctgttacaaagaggtgcgcctcatgggaatggcata
attgaagaggacccaactgctcagccttttcaaagagggacgacattagtggatttgaat
gggacaattcaacaagaaccagtgtttcaacctgttacaaattatatgccaacaatgcag
tggaatggggtaatacaacacgagccagctgatcagtctgtctcaaatcaagctacccct
tttggggcaaacatgtacagtacgggatccggcagttcccatggcttctcaaaagatgat
gaacagaagatccaggcagactgcctagcagctattgcgttgcagcttcttttgaaacta
aagagacacctaaagattgtgtatagcctgaatgatgcaaggtgccaggccttttctcca
gctgatccccttaaaccgggagatgttctctccaggcagaacattccttttgacctcagt
gaaacacataccaccttgcctacaacgcatcaagaattggtacaaagatatcaggaattc
aagaatgcgttgagggaagatactgttgattactctacttacacagccaacatcaagaga
aaacgtccggccccaagaaaaggacggaaatctgtaggtggagatgatgacggtgatgat
gatgatgaagattggacaggtgggcctcggaggctgagtaatagtgggaggagaggtaac
tacagtagaagtcgacagcggttatag
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integrated database retrieval system
