Prunus dulcis (almond): 117621496
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Entry
117621496 CDS
T07328
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117621496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117621496
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117621496
Complex C
U5 SnRNP specific factors
117621496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_2
TPR_8
TPR_CcmH_CycH
ubiquitin
ARM_TT21_C
TPR_1
IgD_del_linker
PMC2NT
Motif
Other DBs
NCBI-GeneID:
117621496
NCBI-ProteinID:
XP_034207905
LinkDB
All DBs
Position
3:14696441..14699917
Genome browser
AA seq
1026 aa
AA seq
DB search
MVFITSPNHKTLTLNLNPKTTTLQTLKLQIEQKSQIPISEQRLFISQSLQLLTQTGSTLL
SDLGIRPLSTLTLHIPLFGGTQPPNVPKPRLEFLNSKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSATTIGGAAAAAAPPGVGRGRGKPEEEEEDEGEDKGYDENQKFDEFEGN
DVGLFASAEYDDEDKEADAVWEAIDTRMDSRRKDRREARLKEEIEKYRASNPKITEQFAN
LKRKLYTVSAQEWESIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEKEHVTALDPKSR
AASGTETPWSQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKIT
SDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIQKGCEECPKSE
DVWLEACRLANPDEAKAVIAKGVKTIPNSVKLWMQAAKLEHDDLNRSRVLRKGLEHIPDS
VRLWKAVVELANEEDARLLLHRAVECCPLHIELWLALARLETYDNAKKVLNKAREKLSKE
PAIWITAAKLEEANGNTSMVGKIIERGIRALQREGLAIDREAWMREAEAAERAGSVATCQ
AIIRNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQL
EKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEE
IWLAAFKLEFENHEPERARMLLAKARERGGTEKVWMKSAIVERELGNLDEERKLLDEGLK
RYASFFKLWLMLGQLEERLGHLEKAKEAYDSGLKHCSNSIPLWLSRANLEEKMVGLSKAR
AVLTMGRKKNPQNPELWLAAVRAELRHGNKKEADILMAKALQECPNSGILWAASIEMVPR
PQRKTKSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYK
FELQHGTEENQKDVLKRCEAAEPKHGEKWQPISKAVENSHQPFEAILKKVVVALGKEESA
AENNKH
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatcacatcccccaaccacaaaaccctaaccctaaatctaaacccgaagacc
accaccctccaaaccctaaagctccaaatcgaacaaaaatcccaaatacccatctcagag
cagcgcctattcatctcccaaagcctccaattactgacccaaaccggctccaccctcctc
tccgacctcggcatcagacccctctcaaccctaaccctccacatccccttgttcggcggc
acccaaccgcccaacgtccccaagccccgcctcgagttcctcaactccaagcctccccca
aattatgtcgctgggctcggccgtggtgccactgggttcaccacacgatccgatatcggg
cccgcccgggccgcccccgacctgcccgataggtcggccacgacaatcggtggcgctgct
gctgctgctgccccgcctggggttggccgcggtcgtgggaagcctgaggaagaggaagaa
gatgaaggagaggataaagggtatgatgagaatcagaagtttgatgaattcgaagggaat
gatgttgggttgtttgcatcggctgagtacgatgatgaggataaggaggctgatgcggtt
tgggaagctattgatacgagaatggactcgaggagaaaagaccggagagaagctcggttg
aaagaagagattgagaaatacagagcttcgaacccgaagatcacggagcagtttgcaaat
ttgaagagaaagttgtacaccgtgtctgctcaggaatgggagagcatacccgaaattgga
gactattcattgaggaacaagaagaagaggttcgagagctttgtgccggtgcccgatacg
cttttagagaaggcgagacaggagaaggagcatgttacggctttggaccccaagagtagg
gcagctagtggtacggaaacgccatggtctcaaactccggttacagatttgaccgccgta
ggtgagggtagaggtactgtgttgtcattgaaattagataggctttctgattctgtttct
gggctgacggttgtggacccaaaagggtaccttactgatcttaagagtatgaagattact
agtgatgctgagatttctgatattaaaaaggccagattgttgctcaagagtgtaacacag
acgaatccgaagcacccacctggttggattgcggctgcaaggctagaggaggtggctggg
aagattcaagcagccaggcagttgattcagaaagggtgtgaggagtgtcccaagagtgag
gatgtgtggttagaggcgtgtaggcttgctaacccggatgaagctaaggctgtgattgcc
aagggagtcaagacgatacccaattcggtgaagttgtggatgcaggctgcaaaactagag
catgacgatttgaataggagcagagtgttgaggaaagggttggaacacattcctgattct
gttaggctgtggaaggcggttgtggagctggcaaatgaggaagatgcaagacttctgctt
cacagggccgtggagtgttgtcccttgcacattgaattgtggcttgcacttgcaagattg
gaaacttatgataatgctaagaaggtcctcaataaggcaagagaaaagctatcaaaggag
ccagccatttggatcactgcggccaagttagaagaagctaacgggaatacgtccatggtt
gggaagattattgaaagaggtataagggccttgcaaagggaaggattagcgattgataga
gaagcgtggatgagggaggctgaagctgctgagcgtgcagggtctgttgcaacttgccaa
gcaatcattcggaacacaattgggattggtgtggaggaggaggatagaaagcgcacatgg
gttgctgatgcagaggaatgcaagaaaaggggttcgattgagacagccagagctatttat
gctcacgcacttactgtgttcttaaccaagaagagcatatggctcaaagcagcacaactt
gaaaagagccatgggactcgggaatctcttgatgctttgcttcgtaaagcagtgacatat
cgaccacaagctgaagtcttgtggcttatgggagctaaggagaagtggcttgctggggat
gtgcctgctgcccgtgccatcctccaagaagcttatgctgctatacccaattctgaagaa
atttggcttgctgcatttaaacttgaatttgagaaccatgaacctgagagagctagaatg
cttcttgccaaagcccgagaaaggggaggcacagaaaaagtttggatgaaatcagcaatt
gttgagagagagttagggaaccttgatgaggagaggaagttacttgacgagggattgaag
cggtacgctagcttctttaaattgtggttgatgcttggacaactagaggaacggcttggt
catttggaaaaagccaaggaggcttatgactcaggtctgaagcactgctccaattctatt
ccactctggctttctcgtgctaatctggaagagaagatggttgggctgagtaaagctcgt
gcagttctcacgatgggcaggaagaagaatcctcagaatcctgaattgtggcttgctgct
gttcgagctgaattgaggcatggcaataagaaggaagctgatatcttgatggcaaaggct
ttgcaggagtgtcccaatagtggtatcttgtgggctgcatctattgagatggtaccccgt
ccccaacggaagaccaagagtatggatgccctcaagaaatgtgatcatgatccccatgtc
attgctgctgtggctaagttattttggcatgataggaaggttgacaaagctaggaattgg
ctaaacagggcagtgacacttgctccagatattggggatttctgggctttatactacaaa
tttgaacttcaacatgggactgaggagaaccaaaaggatgtgctgaaaaggtgcgaagct
gcagaaccaaagcatggtgaaaaatggcaacctatttcaaaggctgtggagaactctcac
caaccatttgaagctatcttgaagaaagtagtggttgctcttgggaaggaagagagtgca
gccgaaaataataaacactag
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