KEGG   Prunus dulcis (almond): 117621593
Entry
117621593         CDS       T07328                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117621593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117621593
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117621593
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 117621593
NCBI-ProteinID: XP_034208050
LinkDB
Position
3:5339045..5342535
AA seq 387 aa
MSHSKTSQGDGSNNAGKRNLPSWMSSRDNENESIGKKPTRAGECEESDEGANPRLAKGRG
GASSSGTTKFSKLMLLSAQEGVVFVLSGFVNPERSVLRSQALEMGAEYQPDWNSDCTLLV
CAFPNTPKFRQVEADCGTIVSKDWISECYRQKKLVDIESYLMNAGKPWRKSSISHDNSQD
KKVSQPRKSKKQDGDSPSKPTASSNPKQIKASNSVKECFSPSKVKKWAVDDLNKTISWLE
SQEEKPEPDEINQIAAEGILTCLQDAIDSLEQKQDVRQITEQWNFIPRVVEELAKLEGTR
NESAAVSKEDLCRQVMECKRIYEVELKNLGDDLSKKKKPKTERQERDSGRTEALSSGTAG
YDSDETIEMTEEEIDLAYKNVVASKIP
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgtctcattcgaaaacaagccagggtgatggttccaataatgctgggaagcgaaacctt
ccttcatggatgagttcaagagacaatgagaatgagtctattggaaagaaaccaactcgg
gctggtgaatgtgaggagagtgacgagggtgcaaaccccaggctagccaaagggcgtgga
ggtgcatccagttcgggaaccacaaaattttccaaacttatgttgttatctgcccaggaa
ggagtagtgtttgtactgtctgggtttgttaatcctgagcgcagcgttctgcggtcacag
gccttggaaatgggagcagaatatcagcctgactggaactcagattgcactctcttggtt
tgtgcatttccaaacaccccaaagtttcgacaagttgaggcagattgtggaactatagtt
tcaaaggattggatatcagagtgttacagacagaagaagcttgttgatattgaaagttac
cttatgaatgctggaaaaccctggcgtaaaagcagtatttcccatgacaacagccaagac
aaaaaggtatcacaacctagaaaatcgaagaagcaagatggagattcaccatcaaaacca
actgcatcatcaaatccaaagcagattaaagcttctaattctgttaaggagtgcttttct
ccttctaaagtgaagaagtgggcagttgatgatttgaataagacaatttcatggctggag
agtcaagaagaaaagccagagccagatgagataaaccaaatagcagctgaagggatttta
acttgtttacaagatgcaatagattctcttgaacaaaagcaggatgtccggcaaataact
gagcaatggaatttcattcctcgtgtagtcgaagagttggcaaagctcgagggcacgaga
aatgagtctgcggcagtatccaaggaagatctttgcagacaggtaatggagtgtaaaaga
atttacgaggtggaacttaagaatttaggtgatgacctgtcaaagaagaagaagccaaag
actgaaagacaagagagggacagtgggagaactgaagccttatccagtggtacagcagga
tacgacagtgatgaaacaattgagatgacagaagaggaaatagaccttgcatataagaat
gttgttgcttctaagatcccctaa

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