Prunus dulcis (almond): 117621647
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Entry
117621647 CDS
T07328
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117621647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117621647
Enzymes [BR:
pdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117621647
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117621647
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
117621647
NCBI-ProteinID:
XP_034208102
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All DBs
Position
1:34347892..34353849
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AA seq
682 aa
AA seq
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MVGSEGPNASSPTQQPPKKYDTTIFLSGPTQSDLQRNAELEKFLIDSGLYESRDEAEKRV
EVLGRIDRIVKDWVKQLTSQRGYTDQMVEDANAVIFTFGSYCLGVHGPGADIDTLCVGPS
YVNREEDFFIILHDMLAEMEEVTELQPVPDAHVPVMKFKLRGISIDLLYASISLLVVPED
LDISHESVLFDVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVT
GFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVTLCSIEENELGFPTWD
PRKNPRDRFHHMPIITPAYPCMNSSYNVSISTLRVMTEQFHHGNKICEEIELNKTQWSAL
FEPYLFFEAYKNYLQVDIVAADSDDLLAWKGWVESRFRQLTLKIERDTNGMLQCHPYPKE
YVDTSKPCPHCAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVCH
VRRKQLPPFVFPDGYKRPRPLRHASQQDERNDEDAVGSGSGSAERHIKRKIDPKTEDMGP
IKRVKQTAISPPRTESVSPSKNAGRSGGTPDISFSNGNRLECRATGDADKNSDVRLPVRQ
LESEKDSVGDMRVVEDVMHESITRNECTSMLVSEFPRIRNEVKPSQEGCAVKPSEQLEKP
LSWNELVVPCAVSFSESKETLA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctgagggtccaaacgcttcttccccgactcaacagccgccaaagaagtac
gacaccacgatctttctttccgggcccacccagtccgatcttcaacgaaatgccgaactc
gaaaagttcttgattgattcggggctttatgagagcagagacgaagctgaaaagagagta
gaggttcttggccgcattgatcggattgtgaaagactgggtgaagcaattgacaagccaa
agaggctacacagatcagatggtggaggatgcaaatgctgtcatttttacgtttgggtca
tattgtctcggggttcatgggcctggagctgacatagacactttgtgtgttgggccatcg
tatgtgaatcgagaggaagatttttttattattttgcatgatatgctggctgaaatggaa
gaggttactgaacttcaaccagttcctgatgctcatgtacccgtcatgaaattcaagctc
cggggaatatcaatagatcttttgtatgcaagcatatctcttttggttgttccagaggat
ctggacatctcacatgaatctgtgctatttgatgtcgatgagcaaactgttcgaagtctg
aatggctgcagggttgcagatcaaattcttaaacttgtccccaatgttgagcatttccgc
acgacactcagatgtttgaagttttgggctaaaaggcgtggtgtttattcaaatgttact
ggattcctgggtggtgtaaattgggctattttagtcgctcggatatgtcagctttatccc
aatgcaattcctagcatgttggtttctagatttttcagagtatacactcagtggcgttgg
ccaaatcctgtaactttatgttcaattgaagagaatgaacttggtttccctacatgggat
cctcgtaaaaaccctcgtgaccgctttcatcacatgccaataataactcctgcgtatcct
tgcatgaactctagttacaatgtctcaataagtactctacgagttatgacagagcagttc
caccatggtaataagatatgtgaggagattgagctgaacaagacccagtggagcgctctc
tttgaaccttatcttttttttgaggcatacaaaaattatctgcaggtggacatagttgca
gctgattctgatgatttgctggcgtggaaggggtgggtggaatcccggtttagacagctt
accctgaagatagagcgagacacgaatgggatgctgcagtgccatccgtatccaaaggaa
tatgtagacacatccaagccatgcccacattgtgctttctttatgggtttgcagaggaaa
gagggagtgagaggtcaagaaggtcagcaatttgatatacgtggaacagttgatgagttc
aggcaagaaataaacatgtatatgttctggaaacctgggatggacatatatgtttgtcat
gttcgccggaagcagcttcctccctttgttttccctgatgggtataaacgtcctcgaccg
ctgaggcatgcaagccagcaggatgaaagaaatgatgaagatgctgtgggatctggttct
gggtctgctgaacgacatatcaagaggaaaattgatcctaaaacagaggatatggggcca
atcaaacgagtgaagcagaccgctattagtcctccacgtacagagtctgtatcgccatca
aaaaatgcaggtagatctggtggaacacctgatatcagcttcagtaatggcaatagatta
gagtgtcgggcaactggagatgcagataagaattccgatgttagattgcctgttagacag
ttggagagtgaaaaggatagcgtgggagacatgcgggtggttgaagatgttatgcatgaa
tcaatcactagaaatgagtgcacatctatgcttgtttctgaattcccaagaatcagaaat
gaggtaaagccttcacaggagggttgtgcggtaaagccatctgaacagttggagaaacct
ctttcctggaatgaattggtagttccatgtgcagtatctttctcagagtccaaggaaaca
ttagcctaa
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