KEGG   Prunus dulcis (almond): 117621663
Entry
117621663         CDS       T07328                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03420  Nucleotide excision repair
pdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117621663
  09124 Replication and repair
   03420 Nucleotide excision repair
    117621663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pdul03051]
    117621663
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117621663
Proteasome [BR:pdul03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    117621663
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      117621663
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD UBA_Ucp12 CUE UBA_RAD5A Dsc3_N Rad60-SLD_2 UBA_3 Permuted_GreAB-C
Other DBs
NCBI-GeneID: 117621663
NCBI-ProteinID: XP_034208117
LinkDB
Position
3:20233119..20237646
AA seq 385 aa
MKVFVKTLKGTNFEIEVKPEEMVADVKKIIETVQGADVYPASQQMLIHQGKVLKDTTTLE
ENQVAENSFIVIMLTKNKASPSGASSTKGAATSQAQPASTPTSTAPPVATPAPVRAVAES
QPVVETPAVAAPTDSSRSDVYGQAASNLVAGTNLEATVQQILDMGGGSWDRDTVVRALRA
AFNNPERAVEYLYSGIPEQAEVPPAAQVPAGEQAANPPAANPPAQAPQPVAPTGGPNANP
LDLFPQGLPNMGANAGAGNLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLMQL
IQAHQADFLRLINEPVEGGEGNLLEQLGAAVPQAVTVTPEEREAIERLEAMGFDRALVLE
VYFACNKNEELAANYLLDHMHEFEE
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaaggtttttgtcaagactttgaagggcactaacttcgagatcgaagtgaaacccgaa
gagatggttgctgatgtcaagaaaattattgagaccgtacagggtgcagatgtgtaccct
gcctcacaacagatgcttattcatcaggggaaagttcttaaggacaccacaactctagaa
gaaaatcaagttgctgaaaatagttttattgtgataatgttaaccaagaataaggcatca
ccaagcggagcctccagtacaaaaggtgcagccacaagtcaggctcaacctgctagtact
cctacctcgacagccccaccggtagcaactccagctcctgtgcgagctgtggcagagtca
cagcctgtcgttgagactcctgctgttgcggctcccactgattcttcaagatcagatgtg
tatggccaagctgcatcaaatcttgttgcaggaactaatttagaggctaccgttcagcag
attctagatatgggtggaggaagttgggatcgtgatacagttgtccgtgctttacgtgct
gctttcaacaaccctgaaagggctgttgagtatttatattctggcattcctgaacaagct
gaagtcccaccagcagcccaagttcctgctggtgaacaagcagcaaatcctccggcagca
aatcctccagcccaggctccacaaccagtagcgcctactggcggtccgaatgcaaatcca
ctagacctgtttccacagggccttcccaatatgggtgcaaatgctggtgcaggcaatttg
gatttcctgcgcaacagtccacagttccaagctttgcgagctatggtgcaagcaaaccct
caaattcttcagcctatgcttcaagagttagggaaacaaaatccacatctaatgcagctc
attcaagcacatcaagctgacttcttacgcttgataaatgagcctgttgaaggcggtgaa
gggaacctattggagcagttgggtgcagcagtgccacaggctgtgaccgtcacccctgag
gagcgagaggccatcgaacgtcttgaagctatgggtttcgatcgggcccttgtgttggag
gtatactttgcatgcaacaagaatgaggagctggcggccaactatcttttggatcacatg
catgagttcgaggaatga

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