KEGG   Prunus dulcis (almond): 117621990
Entry
117621990         CDS       T07328                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117621990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdul03021]
    117621990
Enzymes [BR:pdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     117621990
Transcription machinery [BR:pdul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     117621990
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 117621990
NCBI-ProteinID: XP_034208415
LinkDB
Position
1:31595266..31604103
AA seq 1200 aa
MGASSDAKGDIGMSSKGESFSDIADMDIDDNGYDDDYDYSTSIHDLGEGFLNFFCKEAAI
AFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSKKGESEWRYASVKFGKV
TLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITVEVYTQKLVSSDKFKTGKAQ
YLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQ
SCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWI
WFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDE
VIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKSDNRDDFRN
KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFS
TGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKV
CFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLN
GDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENL
SKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAAKFTHCELD
MSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPL
FQTMTSDCLGKPGRHNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMFRS
EHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDIII
GRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQK
GVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPF
STLSVDDITDQLHSAGFSRWGNERVYNGTTGAMVRSLIFMGPTFYQRLIHMSEDKVKFRN
TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCK
NVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSMGISLKFETRFC
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgggggcgtcatcagatgccaagggagatattggtatgagcagcaagggagaaagcttt
tcagatatagctgacatggatattgatgataatggatatgatgatgattacgattattcg
actagcatacatgacctgggggaagggtttctgaattttttttgtaaggaagctgcaata
gctttcttcaacgagtatggcctcattagtcatcaaatcaactcatacaatgacttcatc
aaaaatggtatacaaagggtctttgattcttttggtgagattatagttgagcctgggtat
gacccatcaaagaagggagagagtgagtggcgatatgcttctgtgaagtttggcaaggtt
acccttggtatgccaagcttttggggtggttcagatgatgaaaaggagtacaaaatgtta
cctaggcatgctcggcttcaaaacatgtcatacgcatccaagatgaaagtgaacattact
gttgaggtatatactcaaaagcttgtgagtagtgataagtttaagactggaaaagcacag
tatcttgataagcaaattctgagtacagacaccagagacattataattggtagtgtccct
gtgatggtgaagtctgacttgtgttggatgaaggacttcgagaaaggagactgtgatttt
gaccatggaggctatttcataatcaagggtgcggagaagacatttattgcacaagaacag
agctgtctgaagagacttcttatcacaaataatcagggattgacagtagcatacaggtca
gaggttaagaggcataggctaataattaggctagttgggatttccaaattagaaaacatt
gaaggagtagagaaagtccttactgtttacttcatgtcgacggaaatccctgtgtggata
tggttttttgcccttggtgtttcatcagacagagaggtgatgaatctgattgattatgat
agtgaagatgccagcatctcaaacatactctttgcctctattcgcgatgcggataaatta
aatgataaagtagatggggggttccgtagggggaagaatgccctcaaatatgtggatgag
gtgataaggaaaaccgcatttcctcctggggaaagtatggaagaatgcattagcctgtat
ctgttccccaatctgaaaggcctaaagcaaaaggctcgttttcttgggtatatggtaaag
tctctattacaggcctatgctggccgcaggaaaagtgacaatagggatgactttaggaac
aagaggttggacttggctggtgagcttctagagcgagagctcaaggcacatattgggcat
gcacggaggcgcatggcaaaggccttgcagagagacctttatggtgatcgtgctgtgcgg
ccaattgagcactatctagatgcttctatagtgactaatggtatttccagagcattctca
accggagcgtggtgtcatcccttcaagaggatggagaggatgtctggtgtagttgcaaca
gttgggcgagcaaatccgctgcagacaatggtggatatgaggaagacaaggcagcaggtt
caatatacagggaaggttggagatgccagatacccgcatccttctcactggggtaaggtt
tgctttctctcaaccccggacggtgagaattgtggacttgtaaaaaatttggctaccact
ggactagttagtacaaatgtactggaatctctgatacctcaattattaacatgtggcatg
gagaaattggtggatgatacttttacatcactgcgtgggaaggataaagtttttctgaat
ggggactgggttggagtttgtgaagattccctctcatttgttttggaactaaggaggatg
cgtcgcaggaaaaagttgccacatcaggtggaaatcaagagagatgtacaccaaggagaa
gtacgcatattttctgatgctggaaggatcctacgccctctcttggtagttgagaatttg
agcaaggttaaagcatccaaaggggggaaaagttctttccaatattttcttgacaatgga
ataatcgagctcattggagcagaagaagaagaagattgctctactgcgtggggtattaag
tatcttttcatggaagacaagggaaaatcagctgcgaagttcacacactgtgaacttgac
atgtcatttttattaggtttaagctgtggcattatcccatatgcaaatcacgaccacgca
cggagggtcctataccaagcccagaagcactctcaacaagctattggtttttctaccacc
aatcctaacctcagagtggatactctgtctcaccaactgcactacccccagaggccactc
ttccagacaatgacatctgattgtcttggaaaaccaggacgccataacagaattgttcca
aagcctgaatactataatggccagaacgctatcgtggcagtcaatgtccacttaggattt
aaccaagaggatagcatagtaatgaaccgggcatcattggaacgtggtatgttccgatct
gaacacataagaagttacaaggctgaggttgacaacaaggagtctctggacaaaaggcgg
aagcctgatgattgtgttaattttggaaagatgcaaagtaaatttggacgtgttgacagc
cttgatgatgatggttttccatatgttggtgcaaatttgcagagtggtgatattataatt
gggaggtgcagtgaatcaggagctgatcatagcatcaaactgaagcacactgaaagggga
atggttcagaaagttctactttcttctaatgatgatggaaagaattttgctgttgtatct
ctaagacaggttcgttctccatgccttggagacaagttctcaagcatgcatggacaaaaa
ggtgtcctggggtttctggagtcccaagagaacttccctttcacaatacagggggtggtt
ccagatattgtaattaatccacatgcatttccttcacgacaaactcctggtcaactccta
gaggctgctttggggaagggaattgcctgtggtggttcaaagagatatgcaacgcctttc
tctactctctctgttgatgacatcacagaccaactgcatagcgctggattttcgagatgg
ggaaatgagagagtatacaatggtacaactggtgcaatggttcgttccctgatatttatg
ggcccaacattttaccagcgcttgattcacatgtctgaagataaagttaagtttcggaac
actgggccagtccatcctttgacccgacagccagtggcagatcggaagcgatttggtggg
atcaagtttggtgagatggaacgtgactgccttatagcccatggagcttcagcaaattta
catgaacgcctcttcactctcagtgactcctcccaaatgcatgtttgccagaaatgcaaa
aatgtggcttatgtgatcctacgaacagtcgctggtggccgtaagatcaggggtcctcat
tgccggatttgcgactctgctgatgaccttgttcgggttaatgtaccatatggagcgaag
ctattgtgccaggagcttttcagcatgggcataagcttaaagttcgagacccggttttgt
tga

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