Prunus dulcis (almond): 117622031
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Entry
117622031 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117622031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117622031
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117622031
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117622031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DNA_pol_phi
Nop14
BUD22
DUF4729
Myc_N
YL1
RNA_pol_3_Rpc31
SDA1_dom
zf-RING_UBOX
Tim54
CDC45
Pox_Ag35
Cwf_Cwc_15
Zip
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117622031
NCBI-ProteinID:
XP_034208429
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All DBs
Position
3:14084856..14089663
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AA seq
426 aa
AA seq
DB search
MARFALGGDEDGEGEGSRIPRPKKPRLAPNLLPQYPAARIAIIEQQPLQPPQPQSQQVRT
VAEDEEADEESEGEEEESESEVEADEESEEEEEEEEEEEEEEDAEGEEEITVDCLQQVGN
SYPLRVPRIIDLLLQNRTAQANHQVGSASASLTSDARVQEGSPPPISPVTDGSLVFTLAD
PEVLDCLICYEPLTIPVFQCENGHIACSSCCTKSKNKCPSCSWPIGYNRCRAIEKILESI
RISCQNIKHGCKEMVTYNKKNEHEKACMYSPCSCPLSGCNFISSSKQLYLHFTVSHVDYA
TRFLYGIDFSITLNIKDKFLVLQEKREGILFILDNHAEKLGNLVSLRCIQPIFKGGFYYD
LLAKTNGSSLRFQSFTKNSAGQVISPSSTGYFIVPSDFFSSGKLNMDLCVWRNGQCPTSF
QSIGVA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattcgcgttaggtggagatgaagatggagaaggcgaaggatcccgtattccc
aggcccaagaagcctcgtctcgctcctaatctccttcctcaatatcccgcagctcgcatc
gccataatcgaacaacaaccactacaaccaccgcaaccacaatcgcaacaggtacggact
gttgcggaagatgaagaagcagatgaagaatccgaaggagaagaagaggagagtgaaagc
gaagtagaagcagacgaagagagtgaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagacgcggaaggagaagaagaaatcaccgttgactgcttacagcaagtaggaaat
tcctaccccttacgggtgccgcggatcatcgatttgcttctgcagaaccgcacagcacaa
gccaaccaccaagtgggttctgcttcggccagccttacatccgacgccagagtccaagag
ggcagtcctcctccgatctcacccgtcaccgatgggtcgcttgtcttcaccttagccgac
ccagaagtgcttgattgcctcatttgctatgaacccttgaccatccctgtcttccagtgt
gaaaatgggcatatagcttgctcctcttgctgcaccaagagtaaaaataaatgcccctcc
tgttcctggcccattggctataatcgttgccgggccattgagaagattctggaatcaatt
agaatttcatgccaaaacatcaagcatggctgcaaagaaatggtaacttacaataaaaaa
aatgaacatgaaaaggcatgtatgtattcaccttgttcatgccccctttcgggctgcaac
ttcatctcttcaagcaagcagttatacctacacttcactgttagtcatgtggattatgca
acacgcttcctgtatggcatcgatttttccatcaccttaaatattaaggacaaatttctt
gttctccaagaaaagagagaaggtatattatttatccttgacaatcatgctgaaaaactt
ggaaatttagtgtcgcttcgttgtattcaacccatcttcaagggaggcttctactatgat
cttcttgctaaaaccaatggaagttctctcagattccagtccttcacaaagaactctgca
ggccaggttattagcccttcttcaacaggttactttatagtccctagtgattttttcagt
tctggcaagctcaacatggatctctgcgtatggcgtaatggtcaatgcccaacatccttt
caaagtattggtgttgcttaa
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