Prunus dulcis (almond): 117622125
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Entry
117622125 CDS
T07328
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117622125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117622125
03036 Chromosome and associated proteins [BR:
pdul03036
]
117622125
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117622125
Coactivators
SAGA/TFTC/STAGA complex
117622125
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117622125
STAGA complex
117622125
TFTC complex
117622125
SAGA complex
117622125
SLIK complex
117622125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Herpes_U34
Motif
Other DBs
NCBI-GeneID:
117622125
NCBI-ProteinID:
XP_034208569
LinkDB
All DBs
Position
3:complement(18492714..18498104)
Genome browser
AA seq
543 aa
AA seq
DB search
MSIVPKENVEVIAQSIGINNLSPDVALALAPDVEYRLREVMQEAIKCMRHSRRTRLTADD
VDGALNLRNVEPIYGYVSGGPLRFKRAIGHRDLFYIDDKDVEFKDVIEAPLPKAPLDTGI
VCHWLAIEGVQPAIPENAPVEVLAAPSDSKKYEQKDDGIPVDIKLPVKHILSRELQLYFD
KITELVVSRSDLVIFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNDYPLLFALMRVV
RSLLQNPHMHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHV
YNTLQSRLTKTLVNAFLDPKRTLTQHYGAIQGLAALGPSVVRLLVLPNLESYLRLLEPEL
LLDKQKNEMKRHEAWRVYGALLNAAGQCIYDRLKMFPLLPSPAPQSFWSTSQRVITMPNK
RKGSVEHMEKQPPLKKIATDGPTGLVPTNSSPSHMEVEIATPAPSGDTDAAPPSSSGQMP
NEGVSNSRSRRDRASGRSLKKSALLTQVWKDDLNSGHLLVSLFELFGEDILSFVPAPEMC
LFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtgcctaaagagaatgttgaagtaattgcacaaagcattgggatcaacaac
ttgtctccagatgttgctctcgctctagctcccgatgtcgaatatcgcctgcgtgaggtt
atgcaggaggctattaaatgcatgcgtcactcgaggagaactagattgacggctgatgat
gttgatggcgcactaaacttaagaaacgttgagccaatatatggttatgtttctgggggt
cctttgcggttcaaaagagctattggacatagggacttgttttacatcgacgacaaggat
gttgaatttaaagatgtgattgaagctcctttaccaaaagcgccacttgatactggaatt
gtttgtcactggctagctatagaaggtgtacaacctgcaattccagaaaatgctcctgta
gaagtacttgcagctccttctgatagtaaaaagtatgaacagaaggatgatggaattccc
gttgacattaaattaccagttaagcacatattgtctagggaacttcagctatattttgac
aaaatcactgagcttgtcgtgagtaggtccgatttggttatttttaaagaagcattagtg
agtttggccactgattcgggacttcatccattagttccttatttcacatgctttatagct
gatgaggtttctcgtggtttgaatgattatccacttctatttgctttaatgcgagttgtt
cggagtcttctccagaatcctcacatgcacatagaaccttatctacaccaattgatgcca
tctgtggtcacttgccttgttgcgaaaaggttaggcaataggtttgctgacaaccattgg
gaacttagggacttcactgcgaacctggttgcttcaatctgcaaaaggtttgggcatgtc
tataacactctccagtcccgtcttacaaaaactttggtcaatgcatttttggacccaaag
cggacattgactcaacactatggtgcaattcaaggtttagctgctctaggccccagtgtg
gttcgccttcttgtgctgccaaatctggagtcatatctgcgacttcttgaaccagagctg
cttcttgacaagcaaaagaatgagatgaagaggcatgaagcttggcgtgtttatggagcc
ctgttgaatgcagcgggtcaatgcatttatgataggctcaagatgttcccacttttgcca
tctccagcaccccaatctttctggagtaccagtcaaagagtcattactatgccaaataaa
cgcaagggaagtgtggagcacatggaaaagcaaccacccctgaagaaaattgcaactgac
gggcctacgggtttagtgccaactaattcttcaccgtctcacatggaagtagaaatagca
actccagccccttcaggggatactgatgcagcccccccatcatcttctgggcagatgcct
aatgagggcgtttcaaacagcagaagtagaagggacagggcttctggtcggtctctaaag
aaatcagctctgctcactcaggtttggaaggatgacttaaattctgggcatctcctggta
tcgttgtttgagttgttcggtgaagacattctctccttcgttccagctcccgagatgtgt
ttgtttttgtaa
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