Prunus dulcis (almond): 117622207
Help
Entry
117622207 CDS
T07328
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04142
Lysosome biogenesis
pdul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117622207
04148 Efferocytosis
117622207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117622207
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117622207
Hops complex
117622207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS18_solenoid_2nd
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
DUF8145
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117622207
NCBI-ProteinID:
XP_034208688
LinkDB
All DBs
Position
3:18228684..18233397
Genome browser
AA seq
951 aa
AA seq
DB search
MYQWRKFEFFEKKLAGKCSIPEEVSGRIECCSSGRGKVVIGCDDGTVSFLDRGLNFSYGF
QAHSSSALFLQQLKQRNYLVTIGEDEQITPQQSAMCLKVFDLDRMQSEGTSSSSTSPDCI
GILRIFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLEVDN
LSDKSQSSVTGLGFRVDGQALQLFAVTPSSVSLFILQNKTSRGQTLDQIGSNANSVAMSD
RSELIIGRPEAVYFYEVDGRGPCWAFEGQKKFLGWFRGYLLCVIADQRNGNDTFNIYDLK
NRLIAHSLVVKEVSHMLCEWGNIILIMADKSALCIGEKDMESKLDMLFKKNLYTVAINLV
QSQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLT
NYLEKLHEKGLASKDHTTLLLNCYTKLKDVDKLNVFIKSEDGVGEHKFDVETAIRVCRAT
NYHEHAMYVAKKAGKHEWYLKILLEDLGRYEEALQYISSLEPSQAGVTVKEYGKILVEHK
PVETIEILMRLCTEDGESGKRGAANVAYLNMLPSPVDFLNIFIHHLPSLMDFLEKYTNKV
KDSPAQVEIHNTLLELYLSNDLSFSSISQASNGEDLNLRARSGATATSRSGSNGKFIADG
KDSNKEKDRLEKQEKGLRLLKSAWPSELEHPLYDVDLAIILCEMNEFKEGLLYLYEKMKL
YKEVIACYMQAHDHEGLIACCKRLGDSGKGGDPSLWADLLKYFGELGEDCSKEVKEVLTY
IERDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRAIDKYQETTSAMR
KEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCIHSFHQRCLGDNEKECPVCAPEYKSV
LETKRSLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGVISKTSSGPTGGS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaaattcgagttcttcgaaaagaaattggcgggaaagtgctcgatt
cccgaggaagtgagcggaaggatcgaatgttgctcgagcggcagagggaaggtggtgatc
ggttgcgacgacggcaccgtgagcttcctcgaccgcggcctcaacttcagttatggcttt
caagctcactcctcctccgcactcttccttcagcagctcaagcaacgcaactatttggtg
acaatcggagaagatgaacaaattactccgcagcaatcggcaatgtgccttaaggttttc
gacctggatagaatgcagtcggagggcacgagctcgagctcaacgagccctgattgcatt
gggatcttgaggatattcaccaaccaatttcctgaagcaaagattacgtcgtttctagta
ctagaggaagcacctccaatactgcttatagctattggcttagataatggttgcatttac
tgcattaaaggggatattgcacgagaacgtatcaccaggttcaagcttgaggttgataat
ctatctgacaagagccagtcctcggtgacgggactggggttcagagtggatggtcaggcc
cttcagttgtttgccgtgactccatcttctgtgagcttgttcatcttgcagaataaaact
tcaagggggcaaaccctagatcagattggaagtaatgccaacagtgttgccatgagtgat
cgctcggagttgataattggtcgacctgaggctgtgtatttttatgaagttgatgggcga
ggcccttgttgggcttttgaaggacaaaagaaatttttggggtggtttcgtggatacctt
ctgtgtgttattgcagatcaaagaaatggcaacgatactttcaacatttacgacctgaag
aaccgtctaattgcccacagcctagtggttaaagaggtttctcacatgctttgtgaatgg
ggaaacataatacttataatggctgacaagtcagctttgtgcatcggggagaaggatatg
gagagcaagttagatatgctctttaagaagaatctttatactgttgccatcaaccttgtt
cagagtcagcaagcggatgctgccgcaactgcagaagtgctaagaaagtatggggatcat
ctgtatagcaagcaagattatgatgaggcaatggctcagtacatccataccattggtcac
cttgagccttcttatgtgatacagaagtttctagatgcacaaagaatctacaaccttaca
aattacttggaaaaattgcatgagaaggggcttgcttctaaagatcataccactcttcta
ctgaattgctacaccaaattgaaagatgttgacaagctgaatgtgttcattaaaagtgag
gatggtgttggagaacataagtttgatgtggagactgcaataagagtctgccgtgcgacc
aactaccatgagcatgcaatgtatgttgctaaaaaggcagggaagcacgaatggtactta
aagatcttacttgaagaccttggccgatatgaggaagccttgcaatatatttcaagcctt
gaaccaagccaagctggagtgacagtgaaagagtatggtaagattcttgtagagcacaag
cctgtggagacaattgagatacttatgaggctgtgcactgaagatggagaatcaggcaag
agaggagccgctaatgttgcatacttaaatatgttgccatctcctgttgattttcttaac
atcttcatccatcatctgccgtcgcttatggattttcttgaaaagtataccaacaaggtg
aaggactctcctgctcaagtagaaatccataacacactcttggagttgtacttgtccaat
gacttgagcttctcatcaatatcacaagctagcaatggtgaagatctaaatctcagggct
agatcaggtgcaactgcaacgtcaagatcagggtccaatgggaaatttattgctgatggc
aaagattcaaataaggaaaaggaccgtctggaaaagcaagagaaagggctacgactgctt
aagagtgcatggccatctgagctggaacatccactttatgatgttgatcttgccataatc
ctttgtgaaatgaatgaatttaaggaaggccttctctatctatatgaaaaaatgaaactc
tataaagaggtgattgcttgctacatgcaagctcatgatcatgagggtttgattgcatgc
tgcaaacgactaggggattcaggtaagggtggggacccaagtctgtgggcagatctgcta
aaatattttggtgaacttggagaagattgctccaaggaagtgaaggaagttttgacatat
atagaaagggatgacatcttgcctcctattattgttcttcaaacactgtccagaaatcca
tgtctcacactctctgtcattaaggattacattgctcgaaagcttgaacaagaatcaaag
ttgatcgaagaggaccgtcgagctattgacaagtatcaggaaaccacatcggcaatgaga
aaagaaattcaggatcttaggacaaatgctagaatttttcagctcagcaagtgcactgca
tgtactttcactcttgatctcccagctgtgcattttatgtgtatccactcattccatcag
cgatgcctcggcgataatgagaaagaatgtcctgtatgtgctccggaatacaaatctgtg
ctagaaacgaaaagaagtttagagcagaactccaaagatcaggatcggttcttccagcaa
gttaaaagttcgaaggatggtttttctgtgatcgctgagtattttgggaagggggtcatt
agcaaaaccagtagtggacccacaggtggttcttga
DBGET
integrated database retrieval system
