Prunus dulcis (almond): 117622252
Help
Entry
117622252 CDS
T07328
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117622252
Spliceosome [BR:
pdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117622252
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_ACIN1
RRM_10
DUF4523
DUF8400
Motif
Other DBs
NCBI-GeneID:
117622252
NCBI-ProteinID:
XP_034208746
LinkDB
All DBs
Position
3:21942196..21946075
Genome browser
AA seq
482 aa
AA seq
DB search
MSTSGTPQFRYTQTPSKVLHLRNLPWECAEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFNDAETASSARNALDGRSIPRYLL
PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIMQPAVGPDGKKKEL
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDVNTAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPEASLLAAQQVSGYPAAPAAW
QNPQAAPMYHGNEFSGAASMQAQGPPGQGPSWDPAMQAGRSTFVSVPSTFPGQTFHASSG
PVYSSAAMPPGSSPLQTGPTTSSSMASRGISQPGGPPNLRPGGGASPPGVGPPGASPSYY
GQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcggggacgccgcagtttcggtacacgcagaccccgtcgaaggtgctccac
ctccggaacctcccatgggagtgcgccgaagaggagctcatcgagctctgcaagccgttc
ggcaagattgtcaacaccaagtgcaatgttggagccaaccgcaaccaagccttcgtcgaa
tttgctgacctaaaccaggccataaatatggtttcatattatgcttcatcctcagagcct
gcacaggtccgtggtaagacagtttacattcagtattcaaatagacacgaaatcgtcaac
aacaaaagtcctggagatgttcccggaaatgtcttgttggtcaccattgagggtgttgaa
gctggcgatgtgagcattgatgttattcacttggtgttttctgcttttggctttgtgcac
aagattgctacgtttgaaaaagcagcaggcttccaggcattgattcagttcaatgatgct
gaaactgcatcttcggcaaggaatgccttggatggaagaagtatacccaggtatttgctt
ccagagcatgttggttcatgccacttacgtatttcatattccgcacacactgatttgaac
atcaagttccagtctcaccgaagcagggactatacaaatccgtaccttcctgtaaatcct
actgcaatagagggaattatgcagcctgccgtaggtcctgatggaaagaagaaagagctt
gagagtaatgtgctacttgcttcaatcgaaaatatgcagtatgctgtcactgtggatgtt
cttcacacggtattttctgcatttggcactgtccagaaaattgctatatttgagaagaat
ggtcaaacacaggcattggttcaataccctgatgtcaataccgcagcagttgcaagggaa
gctttagagggacattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttttagtgacaaaagtagagattatacaatccca
gaagctagtttgcttgcggcgcagcaagtttctggttaccctgctgctccagcagcttgg
cagaatccccaggctgctccaatgtaccatgggaacgagttcagtggtgcagcttctatg
caggcccaagggcctccggggcaagggccatcatgggatccagccatgcaggcgggcaga
tcaacgtttgtttcagttccgagcacgtttcctggtcaaacatttcatgcatcctcaggt
ccagtatattcctctgcagcaatgccgccaggttcttcacctctccaaacaggcccaact
acttcctccagtatggcttctaggggaatatctcagccaggtggtccgcccaacttgcga
ccggggggtggtgcttcacctccaggagttggacctcctggtgcctcaccatcctactat
ggccaataa
DBGET
integrated database retrieval system
