Prunus dulcis (almond): 117622298
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Entry
117622298 CDS
T07328
Name
(RefSeq) nuclear pore complex protein NUP133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117622298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117622298
03036 Chromosome and associated proteins [BR:
pdul03036
]
117622298
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117622298
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117622298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
117622298
NCBI-ProteinID:
XP_034208822
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Position
3:18239885..18246668
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AA seq
1315 aa
AA seq
DB search
MFSPGTKRSNVNPRRDPGSPATPLVENRRSVSDNPVPNRPSTGTPAPWAPRLSVLARVLP
ANQSEKGDEIKPVYVGEFPQVVRDEQASMVQKHVHGDTYVSGGMERGTSLAWIICGNRLF
VWSYLSPAASINCIVLEIPANVFEGGDVGRSGGNCWLLCVVNWDSTSTRTKKVVKHCSSA
GIVLCNKKTRAAVYWPDIYAEGRTAPVVSVASYDELEANSLPIDRKTTPKRQQLNMRHRS
SLTGFCTFNSLIASAVPDSQNMCVALACSSDGELWQFHCSPSGVSRKKVYRDNQTLSSQG
GDNGQNLGSKGYPRSLTWCFPSLPMQESNRQFVLLTDHHIQCFNVELCAEFVVSKLWSHE
IIGSDGDLGIKKDLAGQKQIWPLDMQVDYHGKVTTILVATFCVDRGSGSSYTQYSLLTMQ
YKSGMSVEPTHERVLEKKAPVQVIIPKARVENEDFLFSMRLRVGGKPSGSAIILSGDGTA
TVSHYFRNSTRLYKFDLPYDAGKVLDASILPSTDDGEEGAWVVLTEKAGIWAIPEKAVIL
GGVEPPERSLSRKGSSNEGSAQEERKNLTFAGNFAPRRASSEAWDAGDRQRATTVSARQT
AQDEESETLLSQLFHDYLLSGQVDASFEKLKKSGAFDRDRETNVFARMSRSIVDTLAKHW
TTTRGAEILAMAVVSSQLMDKQQKHTKFLQFLALSKCHEELCSRQRNSLQIILEHGEKLA
GMIQLRELQNIISQNRSSGLNSSHCSPENQISGALWDLIQLVGERARRNTVLLMDRDNAE
VFYSKVSDLEQVFSCLDKQLEYVINAEQPFGIQVQRACELSNACVTIVRTAMQYRSEHHL
WYPPPECLTPWYCLAVVRNGMWHLASLMLQLLKASQLDVSAKSDLYTHLEVLAEVLLETY
AGAVTAKIELGDEHKGLLDEYWNRRDALLDSLYQQIKEFVEVGHQQNLNEGTDDLNEEIL
AKLSSCLLPMAKRHECYSTLWKICCDLNDSGLLRNLMHDSRGPNGGFSYFVFKQLYLRRQ
LSKLLRLGEEFPEELSIFLKYHQDLLWLHEVFLHQFSSASETLHELALSQKESSISEAEE
GTGPEIQTMLPKLADRKRFLNLSKIAAIAGKDVDSETKVKRIEADLRILKLQEEIINLLP
DDETKQSLDTKLLHPEDLIKLCLEGEKGAELSLRAFDVFAWTSSSFRKTRANLLEECWRN
AADQDDWSKLYQASVSEGWSDEETLQNLKDTVLFQASNRCYGPEAETFGEGFDEVLSLRQ
EIAEPPIMKDSVSSVEAVLMQHKDYSEAGKLMLTAIMLGSLQDDNIEQEGPVPME
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccaggaactaagcgatccaatgtgaaccctcgtcgggacccaggatctccg
gccactcctctcgtcgagaaccggcgatctgtttccgataacccggtcccgaaccggccc
agtaccggaactccggctccctgggctcctcgcttatctgttctcgccagagttttacca
gcgaaccaaagtgagaaaggggatgaaattaagcctgtatatgttggagagtttccccaa
gttgttcgtgatgaacaggccagtatggtccagaagcatgttcatggtgatacatatgta
tctggtggaatggagaggggaacatctttggcatggattatatgcggaaacagactcttc
gtgtggagttatctgtctcctgcagcatcgatcaattgcattgttcttgaaatccctgca
aatgtttttgaaggtggggatgtgggcagaagtggtgggaactgttggttgctttgtgtt
gtcaattgggatagcacgtctacaagaacaaagaaagttgttaaacactgtagctctgct
ggtattgtattgtgtaacaaaaaaactcgagctgcagtgtactggcctgacatttatgct
gaaggcagaactgcccccgttgttagtgttgcatcttatgatgaattggaggcaaattct
ttgcctattgataggaagaccaccccaaagcgacagcaactaaatatgcggcacaggagt
agtttgactgggttttgtacatttaactctttgattgcttctgcagtccctgattcccag
aatatgtgtgttgcgcttgcctgtagttcagatggcgagctatggcagtttcattgcagc
ccatctggtgttagccgtaagaaagtatatagggacaatcagactctttcctcccaagga
ggtgacaatggtcaaaacctagggagcaagggttatccaaggtcactgacctggtgtttt
ccaagtcttcctatgcaggaatctaacaggcagtttgttcttctgacagatcatcatatt
caatgttttaatgttgaactttgtgctgaatttgttgtgtcaaaactttggtctcatgag
attattggctcagatggggatctgggcattaagaaagatttggccgggcagaagcaaatc
tggcctctcgatatgcaggtggactatcatggtaaagtgactaccattctggttgctacc
ttctgtgtggaccggggtagtggttcaagctacacacagtattctcttttgactatgcaa
tataaatctggaatgagtgtggagcctacccatgaaagagttttagagaaaaaagcacct
gtgcaagtgataatcccaaaagcaagagtagaaaatgaagacttcttattctccatgaga
ctgcgggtagggggaaagccttcaggatcagcaatcatcctttctggtgatggaacagca
acagtatctcattattttagaaactctacaaggctctataaatttgacctaccttatgat
gctggaaaggttctagatgcttcaattcttccgtctacagatgatggggaagaaggggca
tgggttgtactcaccgagaaggcaggaatatgggcaatacctgagaaggctgttatactt
ggtggggttgaacctcctgaacgaagtttgtcacgtaaaggtagctcaaatgaaggatct
gcacaagaagagagaaaaaaccttacatttgcaggcaattttgctcctagaagggctagt
tctgaagcatgggatgctggagatagacaaagggctacgactgtaagtgcgcgtcaaact
gcccaagatgaagaatcagaaactttactgagccagcttttccatgattatcttttatct
gggcaagttgatgcctcgtttgaaaagttaaaaaaatcaggggcatttgatagggacaga
gagacaaatgtttttgcgcgaatgagcagatcaattgttgacactttagctaaacactgg
acaacaactagaggagccgagattctggcaatggctgtagtatcctcccaactcatggat
aagcaacagaaacatacaaaatttctccagtttcttgctttatccaaatgtcatgaggag
ctgtgttcgagacagagaaattctttgcaaattatcttggagcatggtgaaaagcttgct
ggaatgattcaactaagggaattgcagaacattatcagccagaaccgctctagtggactt
aactcctcccattgtagtccagaaaatcaaatatcaggtgctctctgggatctcattcaa
ttagttggtgagagagcccgccggaatactgttcttctgatggatagggataatgctgaa
gtcttttacagtaaagtttctgatcttgaacaagtgttctcttgcttagacaaacagcta
gagtatgtaataaatgcagagcagccatttgggattcaggtccagagagcttgtgaactg
tcaaatgcatgtgttactatagttcgtacagccatgcaatacagaagtgagcatcacttg
tggtatccgccacctgagtgcttaacaccttggtattgtctagctgtggtgcgcaatggg
atgtggcacctcgcttccctcatgctgcagctgttaaaggcatctcaacttgatgtgtct
gcaaaatcagatttatatactcatctagaagtgctggctgaagttctgcttgagacatat
gccggtgctgtcacagctaaaattgaactaggagatgaacacaaaggcttattagatgag
tattggaataggagggatgcactcctagactcgctttatcaacaaatcaaagagtttgtg
gaagttgggcatcagcagaatttaaatgaaggaactgatgatctaaatgaagaaattctt
gcgaagctttcgtcatgtttgctgcccatggcaaaacggcatgaatgctacagtacttta
tggaaaatatgctgtgacctgaatgattctggactactaagaaatctgatgcatgacagc
aggggacctaatggagggttcagttactttgtgttcaaacaactttatctaaggagacaa
ctttccaaactgcttaggcttggggaagagtttcctgaagagttatccatatttttaaag
tatcatcaagatcttctgtggcttcatgaagtgttccttcatcaattttcttcagcttcg
gaaactcttcatgaattagctctttctcaaaaagaaagctcaatttcagaagctgaagag
gggactggtcctgagattcagactatgttaccgaaactggcagacagaaagcgttttttg
aatctctcaaaaatagctgcaatagcaggtaaggatgttgattctgagaccaaagtgaag
cgcattgaggctgatttaaggattctaaagttgcaggaagaaataataaacctccttcct
gatgatgaaacaaagcaaagccttgacacaaagctacttcatccagaagatcttatcaag
ctgtgccttgaaggtgaaaaaggtgcagagctgtcactgcgagctttcgatgtatttgca
tggaccagctcctccttccgtaagacccgtgcaaaccttttagaggagtgctggagaaat
gctgctgatcaagatgattggagcaaactctatcaggcatcggtatctgaagggtggagt
gatgaggaaaccttgcagaacttgaaagacaccgtgcttttccaggcatcaaatagatgt
tatggaccagaagctgaaacttttggagaagggttcgacgaagtgttgtcactgagacaa
gaaatcgcggagcctccaatcatgaaggattcggtttcttctgtggaagcagtactcatg
cagcataaggattattcagaggcagggaagctgatgctgaccgcgatcatgttgggtagt
ttacaggacgataacatagaacaagaaggtcctgtgccaatggaatga
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