Entry |
|
Name |
(RefSeq) transcription initiation factor TFIID subunit 12b
|
KO |
K03126 | transcription initiation factor TFIID subunit 12 |
|
Organism |
pdul Prunus dulcis (almond)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pdul00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117622456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pdul03021]
117622456
03036 Chromosome and associated proteins [BR:pdul03036]
117622456
Transcription machinery [BR:pdul03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117622456
Coactivators
SAGA/TFTC/STAGA complex
117622456
Chromosome and associated proteins [BR:pdul03036]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117622456
STAGA complex
117622456
TFTC complex
117622456
SAGA complex
117622456
SLIK complex
117622456
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
3:complement(2885305..2891379)
|
AA seq |
632 aa
MAESGPSSSPKPLQPSNPNSIDPTAASTAAATNIIINPNPSNSSSNPPIPSPSALAQSPQ
ISSPPLPPLSNISLPQNQHITPTVGLDYTQKLNQQQQQQQSQSLVQQSQNVNVNSMSNYQ
LQQTLQRSTSMSRVNQLQQQTQNQQQQQHFGMMRQQGGSYPQVNFGGSGAIQQQNQLQQQ
NQPQQSQQQIGGGNLSRSALMAQSGHLPMLSSAAAVAAAQFNLQPQMLASPRQKGGLVQG
SQFHAGNSPAQSLQGTQAMGMMGSINLSSQLRANGALASYAQQRMNSGQLRQQLAQQSSL
TSAQVQSLPRTPSLAFMNPQPSGMTQNGQPAMVQNSLSQQWLKQMPTISGPGSTSFRLQQ
QRQQQVLYQQQLASQKSMPLNQQQLSQLVQQQQQLSHPQLQQQQQQQLQQHQQQQQQIQQ
QSQQQPLNQQQQNSPRMAVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGK
RKIQDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHL
EKNWNLTIPGFSSEERKYQNKSLSSDLHKKRLDMIRTLMESSHLETNTNNPKEMMRGFGN
PVGANHLRPSLGAEQLVSQSTGSQMLQQMTRF |
NT seq |
1899 nt +upstreamnt +downstreamnt
atggctgaaagtggcccatcttcatccccaaaacccctgcaaccctcaaaccccaacagc
attgacccaactgcagcatcaacagcagcagccacaaacattataattaacccaaaccca
tcaaactcttcctcaaacccaccaattccatccccttcagctctcgcccaatctcctcaa
atctcatcccctcccctccctcctttgtccaacatctctctccctcaaaaccaacatatt
acacccactgttggattagattacacacaaaaattgaaccaacagcagcagcaacagcaa
tctcagtcattggtgcaacaatcccagaatgtgaatgtgaattccatgtccaattaccag
ctccagcagaccctgcagaggtctacttcgatgtcccgagtgaaccaacttcagcaacag
actcagaaccagcagcagcagcagcattttggtatgatgaggcagcaggggggttcgtat
ccgcaggtgaattttggtggctccggtgctattcaacagcagaatcagctgcaacagcaa
aaccagccacagcagtcgcagcaacaaattggtggcggaaacttgtcgcgatctgctttg
atggcgcagagtggccacttacccatgttgtctagcgctgctgctgtggcagctgcacaa
ttcaatctgcagccgcagatgttggcctcgccgagacaaaaaggtgggctcgtccaaggt
tcccagtttcatgcaggtaattctcctgcgcaatctttacaagggacacaagcaatgggg
atgatgggatccatcaatttaagttctcaactaagagctaatggggcgctcgcttcttat
gctcaacagagaatgaattcgggccaacttaggcaacaattggcccaacaaagttctctc
acctctgcacaggttcagagcttgccaagaacaccttcacttgcatttatgaacccccag
ccatctgggatgactcagaatggacagccagcgatggtgcagaattctttatcacaacag
tggctgaagcaaatgccaaccatttctggccctggctcaacttcattccgtcttcaacag
cagaggcagcaacaggttctctatcagcagcagttggcttcgcaaaagtctatgcccttg
aaccagcaacagttatcccagcttgtacagcagcagcaacaactgagccatccacagctc
caacagcaacagcaacagcagctgcagcagcatcaacaacagcagcagcaaatacagcaa
caatcacagcaacagcccttgaatcagcagcagcagaactccccgagaatggctgtacct
gcaggccagaaatctcttagtttaacaggatcacagcctgatgctactgcatctggtaca
actacaccaggaggaagttcaagccaaggaacagaagcaactaaccaacttcttgggaag
agaaagatacaagatttagtctctcaggttgattcacagggaaggctggatcctgaagtt
gaagatcttctcttggagattgctgatgacttcattgattctgtgacaacatatgcatgc
aatttggcaaagcatagaaaatcttcaacgttggagtccaaggatgtgttgctacaccta
gagaaaaattggaatttgacaattcctggattttcaagtgaagagaggaagtaccaaaac
aaatctttgtcaagtgatctacacaagaagcgtttagatatgatacggacgctgatggaa
tcatcgcacctggaaacgaataccaataatcctaaagagatgatgagagggtttggcaat
ccagttggtgccaaccacttaagaccttcacttggtgcagaacagttggtttcacaatca
actggttctcaaatgctgcagcaaatgacgcgattctaa |