KEGG   Prunus dulcis (almond): 117622456
Entry
117622456         CDS       T07328                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117622456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdul03021]
    117622456
   03036 Chromosome and associated proteins [BR:pdul03036]
    117622456
Transcription machinery [BR:pdul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117622456
   Coactivators
    SAGA/TFTC/STAGA complex
     117622456
Chromosome and associated proteins [BR:pdul03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     117622456
    STAGA complex
     117622456
    TFTC complex
     117622456
    SAGA complex
     117622456
    SLIK complex
     117622456
SSDB
Motif
Pfam: TFIID_20kDa Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 117622456
NCBI-ProteinID: XP_034209013
LinkDB
Position
3:complement(2885305..2891379)
AA seq 632 aa
MAESGPSSSPKPLQPSNPNSIDPTAASTAAATNIIINPNPSNSSSNPPIPSPSALAQSPQ
ISSPPLPPLSNISLPQNQHITPTVGLDYTQKLNQQQQQQQSQSLVQQSQNVNVNSMSNYQ
LQQTLQRSTSMSRVNQLQQQTQNQQQQQHFGMMRQQGGSYPQVNFGGSGAIQQQNQLQQQ
NQPQQSQQQIGGGNLSRSALMAQSGHLPMLSSAAAVAAAQFNLQPQMLASPRQKGGLVQG
SQFHAGNSPAQSLQGTQAMGMMGSINLSSQLRANGALASYAQQRMNSGQLRQQLAQQSSL
TSAQVQSLPRTPSLAFMNPQPSGMTQNGQPAMVQNSLSQQWLKQMPTISGPGSTSFRLQQ
QRQQQVLYQQQLASQKSMPLNQQQLSQLVQQQQQLSHPQLQQQQQQQLQQHQQQQQQIQQ
QSQQQPLNQQQQNSPRMAVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGK
RKIQDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHL
EKNWNLTIPGFSSEERKYQNKSLSSDLHKKRLDMIRTLMESSHLETNTNNPKEMMRGFGN
PVGANHLRPSLGAEQLVSQSTGSQMLQQMTRF
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggctgaaagtggcccatcttcatccccaaaacccctgcaaccctcaaaccccaacagc
attgacccaactgcagcatcaacagcagcagccacaaacattataattaacccaaaccca
tcaaactcttcctcaaacccaccaattccatccccttcagctctcgcccaatctcctcaa
atctcatcccctcccctccctcctttgtccaacatctctctccctcaaaaccaacatatt
acacccactgttggattagattacacacaaaaattgaaccaacagcagcagcaacagcaa
tctcagtcattggtgcaacaatcccagaatgtgaatgtgaattccatgtccaattaccag
ctccagcagaccctgcagaggtctacttcgatgtcccgagtgaaccaacttcagcaacag
actcagaaccagcagcagcagcagcattttggtatgatgaggcagcaggggggttcgtat
ccgcaggtgaattttggtggctccggtgctattcaacagcagaatcagctgcaacagcaa
aaccagccacagcagtcgcagcaacaaattggtggcggaaacttgtcgcgatctgctttg
atggcgcagagtggccacttacccatgttgtctagcgctgctgctgtggcagctgcacaa
ttcaatctgcagccgcagatgttggcctcgccgagacaaaaaggtgggctcgtccaaggt
tcccagtttcatgcaggtaattctcctgcgcaatctttacaagggacacaagcaatgggg
atgatgggatccatcaatttaagttctcaactaagagctaatggggcgctcgcttcttat
gctcaacagagaatgaattcgggccaacttaggcaacaattggcccaacaaagttctctc
acctctgcacaggttcagagcttgccaagaacaccttcacttgcatttatgaacccccag
ccatctgggatgactcagaatggacagccagcgatggtgcagaattctttatcacaacag
tggctgaagcaaatgccaaccatttctggccctggctcaacttcattccgtcttcaacag
cagaggcagcaacaggttctctatcagcagcagttggcttcgcaaaagtctatgcccttg
aaccagcaacagttatcccagcttgtacagcagcagcaacaactgagccatccacagctc
caacagcaacagcaacagcagctgcagcagcatcaacaacagcagcagcaaatacagcaa
caatcacagcaacagcccttgaatcagcagcagcagaactccccgagaatggctgtacct
gcaggccagaaatctcttagtttaacaggatcacagcctgatgctactgcatctggtaca
actacaccaggaggaagttcaagccaaggaacagaagcaactaaccaacttcttgggaag
agaaagatacaagatttagtctctcaggttgattcacagggaaggctggatcctgaagtt
gaagatcttctcttggagattgctgatgacttcattgattctgtgacaacatatgcatgc
aatttggcaaagcatagaaaatcttcaacgttggagtccaaggatgtgttgctacaccta
gagaaaaattggaatttgacaattcctggattttcaagtgaagagaggaagtaccaaaac
aaatctttgtcaagtgatctacacaagaagcgtttagatatgatacggacgctgatggaa
tcatcgcacctggaaacgaataccaataatcctaaagagatgatgagagggtttggcaat
ccagttggtgccaaccacttaagaccttcacttggtgcagaacagttggtttcacaatca
actggttctcaaatgctgcagcaaatgacgcgattctaa

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