Prunus dulcis (almond): 117622531
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Entry
117622531 CDS
T07328
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117622531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117622531
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117622531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_14
AAA_2
Nucleolin_bd
AAA_28
AAA_22
Bac_DnaA
AAA_16
NPHP3_N
Parvo_NS1
RNA_helicase
AAA_18
AAA_17
ATPase_2
nSTAND3
AAA_3
IstB_IS21
SR-25
AAA_33
AAA_25
Cytidylate_kin2
Rad17
Mg_chelatase
NACHT
IPT
AAA_24
NB-ARC
Viral_helicase1
AAA_19
TsaE
PduV-EutP
ABC_tran
AAA_11
Motif
Other DBs
NCBI-GeneID:
117622531
NCBI-ProteinID:
XP_034209136
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All DBs
Position
3:12018724..12024968
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AA seq
565 aa
AA seq
DB search
MATPGQRGKMVKRVKRVRNPASPAPRLEGGGRSLSDQKQRVLRCRLETFKHLRSSSLDEI
VHQLRNNYRDYHRIKLQSFNKFVQQTLDSPSFKQSKTLIHVSDLEEEEEEEEEEEEEDGQ
SNSQRRQKRAASKSEDKFQRMESAHLRRIRERNGDRPSTSSSSSSSSSSSDDDADEDGSL
SMSEDTIYSEKVEPEFDVMKSSLRASYMESNSAMKPKAAEDQKEKNVEMELPGREEVELM
GGNGGPRRPKTLQAAEAKGSVTGVEVKGSEGPRFSDLGGMEKVIEELKMEVIVPLRHPEL
PRWLGVRPMSGILLYGPPGCGKTKLAHAIANETGIPFYKISATEIVSGVSGASEENIREL
FSKAFRTAPSIVFIDEIDAIASKRESLQREMERRIVTQLMTCMDESHRLVQPADANSDSQ
SSDNKSGYVLVIGATNRPDAVDHALRRPGRFDREIVLGVPDENARLQILSVLTRNLRLEG
SFDLLKIARSTPGFVGADLAALADRAGNIAMKRIIHKRKTYMSIDSMNEECNEDWWRQPW
TPEEMEKLTISMADFEEAVQVVQPS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcctgggcagcgaggaaagatggtgaagagggttaagagggtgaggaatcct
gcgtcgccagcacctaggttagaggggggagggaggtcgctctccgatcaaaagcagagg
gttcttcgttgtcgtttggagaccttcaagcacctgcgatcctcctctctagacgaaatc
gtccaccaacttcgcaataattaccgagactaccaccgcatcaagcttcagtctttcaac
aagttcgtccagcaaaccctagactcgccttcctttaagcaatcgaaaaccctaatccat
gtcagtgacttagaagaagaagaagaagaagaagaagaagaagaagaagaagacggccaa
agcaattcccagagaaggcagaagcgtgctgccagtaagagcgaggataaattccagcga
atggagtctgcccacctcagaaggattcgtgaaaggaatggtgaccgtccatctacatct
tcttcttcttcgtcttcttcgtcttcttctgatgatgatgctgatgaagatgggtctctg
tcgatgtcggaggacacaatatacagcgagaaagtggagccggagtttgatgtgatgaaa
tcgagtctccgagcatcgtatatggagtccaacagcgccatgaagcccaaggcagccgag
gatcagaaggagaagaatgtagaaatggagcttcctggtcgcgaagaagttgagttaatg
ggcggaaatggagggccaaggcggccaaagacattgcaagcagctgaagccaaaggctcg
gttacaggggttgaggtgaagggaagtgaggggccgaggtttagtgacttaggtgggatg
gagaaggtgatagaggagctgaagatggaggtgattgtgccgcttcgccatccggagctg
cctcggtggctcggagttaggccaatgtctgggattttgttgtatggcccgcccgggtgt
ggcaagaccaaattggctcatgccattgccaatgaaaccggcattcccttttataaaatt
tctgccactgaaattgtctctggtgtctcaggtgcatctgaagaaaatataagagagctt
ttttctaaagcatttagaactgccccttcaattgtatttattgatgaaattgatgcaatt
gcttcgaaaagagaaagtttgcaacgagaaatggagaggcgaattgtgacacaactaatg
acttgcatggatgaatctcataggcttgtacaaccggctgatgcaaattcggattcgcaa
agttccgataacaagtctggctatgttcttgttattggagctaccaataggcctgatgct
gttgaccatgctctgagaaggccagggagatttgaccgtgagattgttttaggtgttcca
gatgaaaatgcgaggcttcagattctttctgtgcttacacgcaatctgagacttgaaggt
tcttttgatcttcttaaaatagccaggtctacaccagggtttgtgggggctgatttggca
gccctggctgacagggctggtaacattgccatgaaaaggataatacacaagaggaagact
tatatgtccatagattctatgaatgaggagtgcaatgaagattggtggaggcaaccatgg
acgcctgaagaaatggaaaagcttactatcagtatggctgattttgaggaagcagttcaa
gtggttcagccttcataa
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