KEGG   Prunus dulcis (almond): 117622706
Entry
117622706         CDS       T07328                                 
Name
(RefSeq) ubiquitin receptor RAD23b isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03420  Nucleotide excision repair
pdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117622706
  09124 Replication and repair
   03420 Nucleotide excision repair
    117622706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pdul03051]
    117622706
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117622706
Proteasome [BR:pdul03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    117622706
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      117622706
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_3 TECR_N Rad60-SLD_2 Dsc3_N UBA_RAD5A
Other DBs
NCBI-GeneID: 117622706
NCBI-ProteinID: XP_034209361
LinkDB
Position
3:complement(8017777..8023759)
AA seq 374 aa
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEDGFLVVMLSKSKTSGLAGASSTQPTSTNPPPTPPTTNSTTRPEAPAQPPPVQST
ISASDSANVHTDTYGQAASTLLAGTNLEQTIQQIMDMGGGNWDRETVTRALRAAYNNPER
AVDYLYSSIPETAEVAVPVGHFPASQATETGAANAAPVSGAPNSAPLNMFPQETLSGAGA
GALGSLAFLRNNRQFQALRSMVQANPQILQPMLQELGKQNPQLLRLIQEHHTEFLQLINE
PLEGSEGDIFDQPDGPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEEL
AANYLLENAGDFED
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaagctcactgtaaagaccctcaaaggcagccatttcgaaattagggttcagcccact
gacactgttatggctgtgaagaagaacattgaagatgtacaaggaaaagataattatcca
tgtgggcagcagttattgattcacaatgggaaggtcttgaaagatgaaactacattggct
gacaacaaggtcacagaagatggttttcttgttgtcatgctaagcaagagtaaaacttca
ggcttagcaggggcttcatccactcagcctacttccacaaatcctcctccaactccacca
accacaaattctacaaccagacccgaagctcctgcacaaccaccacccgtacaaagtacc
atatctgcttccgacagtgcaaatgtgcatactgatacttatggtcaagctgcttcaact
ttacttgctggtactaatcttgagcagactattcaacaaataatggatatgggcggtgga
aactgggacagagaaacagttacacgcgcacttcgagcggcatataacaatccagagaga
gcagtcgactacttgtactctagtattccagaaacagcggaagttgcagtgccggtagga
catttcccggcaagccaggcaactgaaacaggggcagccaatgctgcacctgtctctgga
gcacctaactctgctcctttgaatatgtttcctcaggaaacactctctggtgctggtgct
ggtgcacttggatccctcgccttcctcaggaataatcgccagttccaagcattgcgctca
atggtgcaagcaaatccacaaattttacagcccatgctgcaggagcttggaaagcaaaac
ccccagcttttaagattaattcaggaacaccacactgagttccttcagttaataaatgaa
cctcttgaggggtctgaaggtgacatatttgatcagcctgacggccctgaccaagatatg
cctcatgccatcaatgtaaccccggctgagcaggaggccattgaacgactcgaagcaatg
ggatttgatagggccttggtcatcgaggcatttttagcatgcgatcgcaatgaagaattg
gcagcaaactacttattggagaatgctggagattttgaggattga

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