Prunus dulcis (almond): 117622806
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Entry
117622806 CDS
T07328
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Module
pdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117622806
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117622806
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
117622806
NCBI-ProteinID:
XP_034209475
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Position
3:complement(22994848..22997512)
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AA seq
509 aa
AA seq
DB search
MMITFKPRSLTFFVFIAFSIWCSSLLEPCDARKGGKQYWRQNKGASASALRKEQKGYGGN
HHRHQAGPRVSTTPSRGDNYITPEETAAKLQKKGGGNSNVFNVLDYGAKGDGKADDTKAF
EAAWAAACKVQASTINVPSGSVFLVKPISFSGPNCEANIVFQLDGKIIAPTSSGDWGSGL
LQWLEFTKLKGISIKGKGIIDGQGSVWWSDSPTYNIPADQTYSSSQDTVIESDSGKMPST
KPTALRFYGSDGVSVTGITLQNSPQAHLKFDACTNVQVSDISISSPGDSPNTDGIHLQNS
QDVVIFGTSIACGDDCISIQTGCSNIYVHNVNCGPGHGVSIGGLGKDNTKACVSNVTVRD
VKMHNTLTGVRIKTWQGGSGSVQNIMFSNIQVSEVATPIMIDQFYCDKSKCQNETSAVAV
SGVNYVNIQGTYTTKPVHFACSDSLPCTGVSLDTIQLKSVDEGKQLYGPFCWEAYGELKT
STVPEIDCLKKGKPYSSSTGAQSGSNDSC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcacatttaaaccaagaagcctcacattctttgttttcattgccttttctatt
tggtgttcaagcttgttagaaccttgtgatgctagaaaaggaggcaagcagtactggagg
caaaacaagggtgcctctgcctctgccttgaggaaggaacaaaagggttatggcggcaat
caccaccgccaccaggcaggccctagggtgtctacaacaccgtcgaggggagacaattac
atcacaccagaggaaactgcagcaaaactgcaaaaaaagggcggtgggaattccaacgtc
tttaatgtgttggactatggtgctaaaggcgatggaaaagcagatgataccaaggctttt
gaagcagcgtgggcagcagcttgcaaagtgcaggcatcaactataaatgttccttccggg
tccgtgttcctcgtcaaaccaatctctttttctggccctaattgtgaagcaaatattgta
tttcagttagatggcaaaatcatagctccaacaagctcgggagattggggttcaggtctt
ctacaatggctcgaattcacgaagctaaaagggatttcaatcaaaggcaaaggaataatt
gatgggcaaggctcagtttggtggagtgactcacccacatacaatattcctgcagatcaa
acatatagcagttcacaggacacggtcatagaaagtgacagtggaaaaatgccaagcacc
aaaccaaccgctcttaggttctatggaagtgacggcgtgagtgtcactggtataacactt
caaaacagccctcaggcccacctcaagttcgacgcctgcacgaatgttcaggtttctgat
ataagtatttcctcccctggtgacagccccaacacagatggaatccacctccaaaactct
caggatgttgtcatttttggcaccagtattgcttgtggggatgactgtatatccatacaa
actggatgctcaaacatatacgtacacaacgtgaattgtggacccggacatggagtcagc
atcggagggctagggaaggataacactaaagcttgtgtatcgaacgtcacagtccgagat
gtaaaaatgcacaatacactcactggcgtcagaataaagacctggcagggaggatcaggg
tcagtccaaaacatcatgttttcaaacattcaagtatcagaagttgcaaccccaatcatg
attgaccaattctactgtgacaagagcaaatgccaaaatgagacatcagccgtggcagtt
tcgggtgtaaactatgtaaacatacaaggaacctatacgacgaaacctgtacattttgca
tgcagtgacagcttaccgtgtactggtgtgtctttggacaccatacagctgaaatcagtt
gatgaaggcaagcaattgtatggccctttctgttgggaggcgtacggagagctcaaaaca
agcacagtccctgaaattgactgcttgaagaaggggaagccatattcaagcagcacagga
gctcagtctggaagtaatgattcttgctaa
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