Prunus dulcis (almond): 117622875
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Entry
117622875 CDS
T07328
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdul03000
]
117622875
03036 Chromosome and associated proteins [BR:
pdul03036
]
117622875
Transcription factors [BR:
pdul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
117622875
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
117622875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
YL1
CHDNT
CDC45
Motif
Other DBs
NCBI-GeneID:
117622875
NCBI-ProteinID:
XP_034209562
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Position
3:22267346..22272938
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AA seq
644 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKIYSGGISWKKQGGGKVVEVDKADIVGATWMKVPRTN
QLGVRIKDGLYYKFIGFRDQDVTSLTNYFQNTCGLTPEEKQLSVSGRNWGEVDLSGNMLT
FLVDTKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFESIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSELSMS
EELMNTKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHDQIDYVEFERHGAGGSNMHYFDLLIRLKSEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGESQTADGVAPLLEEADDDAVDPHLVRVKNEAGGDESDE
EDEDFVIDKDDGGSPTDDSGEDDSDASESGAEKEKPAKKEPRKEPSTSKVSSSKKQKSKD
GGEDGAKKKKQKKKKDPNAPKRAMSGFMFFSQMERENVKKSNPGIAFTDVGRVLGDKWKK
MSAEEKEPYEAKARQDKLRYKDEISGYKNPQPMNIDSGNESDSG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaatatctctcttggaggccgtggaggcactaatccg
gggcagctaaaaatatattctggagggatttcatggaaaaagcagggaggtggtaaagta
gttgaggttgataaagctgacattgttggggcgacatggatgaaggtcccaaggactaac
caacttggtgttcggattaaagatgggttatactacaagttcattggatttcgtgaccag
gatgtcactagtttgaccaactatttccaaaatacatgcggattaacaccagaggagaag
cagctttctgtaagcggacgtaattggggagaagtcgatttaagtgggaacatgctgact
ttcttggttgacactaagcaagcatttgaggtatctttggctgatgtttcacaaactcag
cttcagggaaaaaatgatgtcatcttagagttccatgtggatgacaccacaggagctaat
gagaaagattcattgatggaaataagttttcacataccgaactccaacactcagtttgtt
ggtgatgagaatcgcccccctgctcaagtttttcgtgacaaaatcatgtctatggcagac
gttggtgctggaggtgaagatgctgttgtcacatttgagagtattgcaatcctcacacct
aggggtcgctacagtgtggaacttcatctttcattcttgcggctacaaggacaggctaat
gattttaaaattcagtacagcagtgttgttcgactgtttcttcttcctaagtctaaccag
ccacatacctttgttgttgttactcttgatccacctatccggaaggggcaaacattgtac
cctcatattgttttgcagtttgaaactgactttgtggttcaaagcgagctgtcgatgagc
gaagaacttatgaacaccaagtacaaggacaagttagaactatcttacaagggactaatt
catgaagtgttcaccacaatattgcgtggcttgtctggtgccaaagttacgaaaccggga
aaattccgtagttgtcaagatggttatgccgtgaaatcttcattgaaagctgaagatgga
gttctatatcctcttgaaaagagcttctttttcctacctaaacctcccacccttattctt
catgatcagattgactatgtggagtttgagaggcatggcgctggaggctcaaatatgcac
tattttgatcttctgatcagactcaaaagtgagcaagaacacctgtttcgaaacattcag
aggaatgaatatcataatctttttgacttcatcagttcaaagggtctcaagatcatgaac
ttaggagaaagccaaacagcagatggtgtggctcctcttcttgaagaggcagatgatgat
gctgttgacccacaccttgtccgtgtgaagaatgaagctggtggtgatgagagtgatgaa
gaggatgaagattttgttattgacaaggatgatggaggttctcctactgatgattctggg
gaggatgattcagatgctagtgaaagtggagctgagaaagagaagcctgcaaaaaaggag
cctagaaaggaaccttcaacttccaaggtatcatcttccaagaaacaaaaatccaaagat
ggaggtgaagatggtgcaaagaagaagaagcagaaaaagaaaaaggatccaaatgcacca
aaaagagcaatgtctggtttcatgttcttctcacaaatggagagagagaatgtaaagaaa
agtaaccccggaattgcatttaccgacgtggggagagtacttggagataagtggaaaaag
atgtcagcggaggagaaagaaccctatgaagcaaaggctcgtcaagataaattacgctac
aaggatgaaattagtggctacaagaacccccaacccatgaatatagattcagggaatgaa
tctgacagcgggtag
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