Prunus dulcis (almond): 117622944
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Entry
117622944 CDS
T07328
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117622944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117622944
03036 Chromosome and associated proteins [BR:
pdul03036
]
117622944
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117622944
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117622944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
117622944
NCBI-ProteinID:
XP_034209657
LinkDB
All DBs
Position
1:34543470..34550381
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AA seq
724 aa
AA seq
DB search
MPGVDSGSGDTRGASGSNDSSLVPYLPELRQPVVYSLHHGLKPPIGRLSISWSRGNNLRV
SVLRPPSAEDSDDVEVGGRVVEVRLSNGDGETGDAKWRRIAYGSVPPFALLQSRRSSVAS
LSKMSMSPSPYNIDWWEYVMEYSKDINSLLGDSKAPLNPVIDDPKTVLRNVEEPTSLKAA
WELMEMFYADKQCQSWLPERLVDWLADYDSLLSSTQPTVHSKLVDFQNELVGLQVIEDNP
KYWEVLSSALAVGWIEIVVKMLRLHGSYQFHQLGNREIENGLVETVSFLISKMPRMRPEV
EYGRLGECYKAKPDFIKAWEKWRGKITKLDCSAFWLQCDHRQTREGLKNMLQIMLGNTDN
ICNVTCHWIELFISHFLYVRPFTVGLESMYSLAQKCMQLKPMSSAHGLIAIILGILGENT
EVILAECSRAFGPWMVAHAIELLTTGSDEAEFLLQEERHSLGGISIADLHRLVYAQVLSS
HPLTWQIAPIYLTSCMKQGMGLLEILLYKLPIQHNETLLKNLEICRLYELDTVSSNIMKI
TGVYHWKHGRKGSGVFWLQQARDEIRLSRIAQHLFDSVGKSISDESFKQWEGLIELLGSE
SKTTGGLEFLHKYRDFKKSLKQVYGGKTTDTARQAVESLISLMKNPSTPQRFWLPLLHDS
LKLLNWQERPLLNVSQTSLLLNKLQELSMAKLRPDFIEADLPPQALSSVRLALATNLGRA
ILEE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtcgactcaggctccggcgatacgcgcggcgcctcaggctctaacgacagt
tctctggtcccatatttgccggagctccggcaacccgtcgtctattcacttcaccacggc
ctcaagcctccgatcggtcgcctttccatctcgtggtcccggggcaacaatctgcgcgtg
tcggttctccggccaccgtccgcagaagactctgacgacgtcgaagttggcgggagagtt
gtggaggtgaggctcagtaatggagacggcgaaactggtgatgcgaagtggcggaggatc
gcgtacggttccgttccaccattcgcgcttctccagagccggaggagctctgtcgcgagc
ttatcgaagatgtcaatgagtccgtcgccgtataacatcgattggtgggagtatgtgatg
gagtacagcaaggacataaattcacttctcggtgactccaaggcgcctcttaatccagtg
attgacgacccaaagacggttttaaggaacgttgaggagcctacctctttaaaagcggca
tgggagctaatggagatgttttatgctgacaaacaatgccaatcatggctaccggaaagg
cttgttgattggttggctgattatgatagtctactttcgagtacacagccaactgtccat
tcgaagcttgtggattttcaaaatgaacttgtcggcttacaggttattgaggacaatcct
aaatattgggaagtgttatcatcagcactggcagttggctggattgagattgtggtgaaa
atgttgcggttacatggatcttatcaattccatcagcttggcaaccgtgagatagagaat
ggacttgtagagacagtttcttttcttatttcaaagatgccacgcatgcgtcctgaagta
gaatatggaaggttaggtgaatgctacaaagcaaagcccgattttatcaaggcatgggag
aaatggagagggaaaattactaaactcgactgcagtgcattctggcttcaatgtgatcac
cgtcaaacccgggagggattgaaaaatatgctacaaattatgctaggaaacactgacaat
atctgcaatgtaacttgccattggatagagctgtttatttctcactttctctatgtcagg
ccattcacagtgggtcttgaaagcatgtatagcctagcccagaaatgcatgcagttgaaa
ccaatgtctagcgcccatgggttgatagcaattattcttggaatccttggggaaaatact
gaggttatcttagcggaatgctcaagagcatttgggccttggatggttgcccatgccatt
gagttgttgaccactgggagtgacgaagcagaatttcttctacaggaagaacgccatagc
ttggggggaattagtatagcagatttacatcgacttgtctatgctcaagttctatcatca
catccattgacttggcaaattgctccaatttatttgacgtcgtgcatgaaacagggaatg
ggtttgttagagattctattgtataagctgcctattcaacataatgaaacacttcttaag
aatttagagatatgccgactttatgaacttgataccgttagttcaaacattatgaagatt
actggcgtgtaccattggaagcatggtaggaaaggttctggagttttttggctacagcaa
gcccgagatgaaattcgtcttagcaggattgctcagcatttgtttgattcagttggaaag
tcaatctctgatgaaagttttaagcaatgggaaggcttgattgaattgttgggttcagaa
tccaagactacggggggtcttgaatttttgcacaagtatcgggacttcaaaaagtccctt
aagcaggtttatggtggaaaaactactgacactgctcggcaagctgtagaatctttgata
tcgcttatgaaaaacccatctacacctcagcgcttttggctgcctcttctgcatgactcg
ttaaagctgcttaactggcaggagcgccctctgctaaatgtctctcagacaagcctcttg
ttgaataaactgcaagagttgtccatggctaagctccgccctgacttcatcgaagcagac
ttgccaccacaggccctcagctctgtaagattagctcttgctacgaatctcggacgtgct
atcttggaggagtaa
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