Prunus dulcis (almond): 117623076
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Entry
117623076 CDS
T07328
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117623076
03036 Chromosome and associated proteins [BR:
pdul03036
]
117623076
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117623076
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117623076
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117623076
microRNA pathway
RISC loading complex
117623076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
117623076
NCBI-ProteinID:
XP_034209818
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Position
3:complement(18660440..18668191)
Genome browser
AA seq
898 aa
AA seq
DB search
MEDVAGPGNAGGDPHSSPPPPTIAPNLKPELVAPPKYSIMSRCGTGTTGQTIPLLANHFK
VSVNVPDAVFYQYFVRITSEDKIAVEGKGIGRKLIDRLYQTYSSDLGGKKFAYDGDKALY
ILGPLPQRRLEFSVVLEETFAKHENGSPLADKRSRRSFRSKTFNVEISYAAEIPLKSIAL
ALRGVDVDNTQDALKVLDIILRQQAANRGCLLVRQSFFHDDSRNFVDVGAGVKGVRGFHS
SFRPTQGGLSLNMDVSTTMILTPGPVIDFLITNQDVREARYIDWVKAKKMLKNMRINARH
RNMEFKVIGLSEKPCNQQYFPMKLKSGNGTSEGQTVEITVYEYFTKHCGVELTSSQYMPC
LDVGKPKRPNYLPLELCSLVSLQRYTKALSSTQRASLVEKSRQKPHERIRTVTDAVKKYQ
YDDDPMLATCGISIEKQLTQVNGRVLETPKLKVGNSEDCVPHKGRWNFNNKTLFNPTRID
RWLVVNFSARCDTSHISRELINCGRKKGIFIERPFTLLEEDPQCRRQSPVARVEKMFEQI
LAKLPGEPQFILCVLPERKNCDIYGPWKKKSLSEFGIVTQCISPSKINDQYLTNVLLKIN
SKLGGINSLLAIEHSSCVPLVNDTPTMILGMDVSHGSPGRSDIPSVAAVVGSRSWPLISR
YRAAVRTQSPKLEMIDALYKPLENGTDAGIIRELLVDFYKTSNGRKPTQIIVFRDGVSES
QFNQVLNIELDQIIKAYQHLGEVDVPKFTVIVAQKNHHTKLFQTGGSTDNVPAGTVVDTN
IVHPRNYDFYMCAHAGMIGTSRPAHYHVLVDEIGFSPDGLQNLIHSLSYVYQRSTTAISI
VAPICYAHLAAAQVGQFMKFEDLSETSSGNGSVTSAESIPFPELPKLHKNVQGSMFFC
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtagctggccctggaaatgccggtggggacccacattcgtccccacctcct
ccaaccatagcccctaatttgaagccagaactagtggctcctcctaaatattctattatg
agtaggtgtgggacaggaactactggacaaacgataccgttgctcgcaaaccactttaaa
gtttctgtgaatgtaccagatgctgtattttaccagtattttgttcgtattacttcagaa
gataagatagctgttgaaggcaagggaattgggagaaaactgattgacaggctttatcaa
acatactcttcagaccttggtggtaaaaagtttgcatatgatggggacaaagctctgtac
atactgggtcctctgccacagagaaggcttgagttttctgttgtgctggaggagacattt
gcaaagcatgaaaatgggagccccctggctgacaaacggtcaagacgttcttttcggtca
aaaactttcaacgtagaaataagttatgctgccgaaatacctctgaagtcaatcgctctt
gccctgagaggagtggatgtagataatactcaggatgcattgaaagtgcttgatatcatt
ctgcggcagcaagcagctaacagggggtgtcttctagtacgacaatcattctttcatgat
gactccagaaactttgttgatgttggagcaggtgtaaagggtgttcggggatttcattcc
agtttccgtccaacacagggtggcttgtccttgaatatggatgtatctacaacgatgatc
ctaacgcctggacctgtcattgattttctgataaccaaccaggatgtacgagaagctcgc
tacattgattgggttaaggccaagaaaatgctgaaaaatatgaggattaacgcaaggcac
cgtaacatggaattcaaagtaataggcttaagtgagaagccctgtaatcaacaatatttc
cctatgaagttaaaaagtggcaatggcacaagtgagggtcagactgtggagattactgtg
tatgaatattttactaagcactgtggtgtagaactcacctcttcccaatacatgccatgc
cttgatgttggcaagccaaaaaggcccaactatctgccactggagctctgttcgcttgtt
tcactacaacggtatacaaaggctttatcttcaacgcagagggcatccttagttgaaaaa
tcaaggcagaagcctcatgaaagaatacgaactgtgactgatgcagtgaaaaaataccag
tatgatgatgatcctatgcttgctacatgtggtatttctatagagaagcaattgactcag
gtcaatggccgtgttctcgagactccgaagttaaaggttggtaacagtgaagactgcgtc
cctcataagggacgatggaatttcaacaataagacacttttcaaccctactcgcattgac
cgttggcttgttgtcaacttctctgcacgctgtgataccagtcatatctcacgggaactg
atcaactgtgggaggaagaagggcatttttattgagcgtccctttacattacttgaagaa
gatccacaatgtagaagacaaagtcctgttgcaagagttgaaaagatgttcgaacagatt
ctagctaagcttccaggggaacctcaattcattctttgtgtcttaccagagagaaaaaat
tgtgatatatatggaccttggaagaaaaaaagtcttagtgagttcgggattgtcacacaa
tgcatttccccttccaagattaatgatcagtacctgacaaatgttcttcttaagatcaat
tctaagcttggaggaataaattctttgttggcaatagagcactcttcatgtgttcctctg
gttaatgatactcctacaatgattctggggatggatgtctctcatgggtctcctggtcgc
tcagatattccttctgttgctgcggttgttggctctcgaagttggccacttatttctagg
tacagagcagctgttagaacacaatctcctaagctagagatgattgatgctctgtacaag
ccacttgaaaatggaactgatgctggtattatcagggaactgcttgtggacttctataaa
acaagcaacggacgtaaaccaactcagattattgtcttcagggacggagtcagcgaatca
caatttaatcaagtcttgaacatcgagctggaccaaattataaaggcttaccagcacctt
ggggaggttgatgttccaaagtttactgtgattgttgctcagaaaaatcatcacacgaag
ctatttcaaaccgggggttccactgataatgttccagctgggacagttgtggacacaaat
attgtgcatccaaggaattatgatttctacatgtgtgctcatgcaggaatgattggaact
tcgcggccagcacactatcatgtcctggttgatgagattggattttctcctgatggcttg
caaaacctaatccactccctttcttacgtgtaccaaaggagtacaactgcaatctccatt
gtggcgcccatatgttatgcccaccttgctgctgcacaagtggggcagtttatgaagttt
gaagatctctcagaaacctcatcagggaacggcagtgtcacttcagctgagagtatccca
tttccagagctccctaagttgcataagaatgtccagggttccatgttcttctgttga
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