KEGG   Prunus dulcis (almond): 117623115
Entry
117623115         CDS       T07328                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pdul  Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdul03036]
    117623115
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117623115
Chromosome and associated proteins [BR:pdul03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117623115
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117623115
SSDB
Motif
Pfam: MMS19_N MMS19_C ATG22 HEAT_EZ
Other DBs
NCBI-GeneID: 117623115
NCBI-ProteinID: XP_034209864
LinkDB
Position
3:4101321..4112396
AA seq 1159 aa
MAETTELIQHIELYVDTSRSPTEQAASFNSIISLVKSDFLTIEVLVKEMRMYLTTTDNVI
RARGILLLAEVLTGLASKPLDNATIHSLIGFFTDRLADWRALRGALVGCLALLRRKVNAG
MVSASDAKLVAQSYIESLQVQSLGQHDRKLCFELLECLLERHPNEIASLGETFFYGICQA
MDGEKDPHCLMLTFPIVETLVRIYPDPSGSLASFCGDLFELLGSYFPIHFTHLKDEDAEV
KRDDLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAK
HAGAIWISLKEAISNSLEKPAMSFTSEPLYGLGFQENEIATEALMLLQKVTLQNEALFLT
LIIQDEGINIVFNSIASHEHYNNIPLQGKQWLHAVGRILYIISKTSMASCNSVFESFFPR
LMNTLEISVTNSAGDCTLNENTFPSKKFNFGALYLCVELIAACRDLIMRSKDLALKPDTS
QETCRYMLQSFADSLVNAFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPISKFL
FGNILTILMSIILVDFNKILLWKLVLKALVHIGSFVDVYHESEKALGYMGAVVDKTVSLV
SRDDVKMPFSLKLEAASEIGASGRNHMLKIVQGMEEAIVAKLSDYVHGNLKSAEKTIQLL
ECYCNKILSWINETGGLEEVLLRFVINIWNCIESCKDFSIQVQEEELLDATMMAMKLAIG
SCSEESQNIIIHKAYSVISSSISIPFKESLDATSSIQLEELSVSEQIDKSSHRDDQIDKF
SLRDEWILSHFASVIIAVRPKAQIVNVKGILHLFMTTVLKGCVPAAQALGSVINKLGTKS
NETANSIDCTLEEAVDMIFRTKLWNLNENGVLRTCGSGNGSKVGLTDLCLGFSSNKLLRV
HAIVGLAWIGKGLLLLGHEKVKDVTKILLECLLSEGRICAMELKQGLLENSYEQHSVMRS
AADAFHILMSDSEVCLNRKFHAIARPLYKQRFFSTVMPILQSCIIKSDSSVCRSMLFRAS
AHLISNAPLIVILSEAKKLMPVLLDGLSLLSEDILDKDKLYSLLLVLSGILTDKNGQVAV
IENAHILVNCLTRLIDYPHMMLVRETALQCLLATSELPYARIFPMRTQVLQAICKALDDP
KRAVRQEAVRCRRAWASIA
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggccgaaaccaccgaattgattcagcacattgagttgtacgtcgacacgtctcgctct
cctaccgagcaggctgcgagctttaattcaatcatttctctcgtgaagagtgacttttta
actattgaagtgctggtgaaagaaatgaggatgtatttgaccactacggataatgtgatc
cgtgctcggggtatacttcttctggcagaagttcttacaggtcttgcatcaaagccacta
gataatgcaactattcatagtttgataggattcttcacagacagactggcagattggaga
gctttacgtggtgcacttgttggttgcttggcactgctgaggaggaaagttaatgctgga
atggtctcggccagtgacgcaaaactggttgctcagtcttacatagagtccctacaggtg
caatctttagggcagcatgacagaaagctttgctttgagcttttggaatgccttttagag
cgccatccgaatgagattgcttcactgggtgaaacctttttttatgggatctgtcaagct
atggatggagaaaaggatcctcattgcttaatgttaacatttcctattgttgagactctg
gtgcgaatatatccagacccatctggctcacttgcaagtttttgtggagatctatttgaa
ttattgggatcttactttcccattcattttactcatctcaaagatgaggacgctgaggtg
aaaagggatgacctttcaaaggcactaatgtcagcattctcgtccacgcctttattcgaa
ccatttgtcattccattgcttcttgagaaactttcttcgtctctgccattagcaaaggtt
gattctttgaagtatcttaaccactgcacagctaaatatggagctgacagaatggcaaaa
catgctggagctatttggatttcactgaaagaagcaataagtaattcattggaaaagcct
gctatgtcctttacttcagaaccactatatggtcttggctttcaagagaatgaaattgca
acagaagctctaatgcttctacagaaggttaccctgcaaaatgaggctttgtttttaact
ttgattattcaggatgaaggtataaacatagttttcaactccatagccagtcatgaacat
tataataatattcccttgcaaggcaagcagtggttacatgccgttggtcgcatcctttat
ataatatccaagacttccatggcttcctgtaacagtgtgtttgaaagtttcttcccccgc
ctaatgaatactctcgagatttctgtgacaaattcggctggggattgcactcttaatgag
aatacttttccctcaaaaaagtttaattttggagctctttatctctgcgtggaattaatt
gcggcatgcagagatttaattatgagatcgaaagaccttgctctgaagcctgatacttca
caggagacatgtcgctacatgcttcagagcttcgcggattcactagtcaatgccttctct
tcttccttggccacgaatgctaatgaagttgctcatggtgcagatatttatttcaaagtg
aagggtttacagattctggctacattccctggagatttcttgccaatatctaaatttttg
tttgggaatattctgacgatactcatgtcaatcatcttagtggatttcaacaagatattg
ctatggaaactagtgttgaaagctttagtccacattgggtcattcgttgatgtgtatcat
gagtctgagaaggcactaggctatatgggtgctgttgttgacaagactgtttcattggtg
tctcgtgatgatgttaaaatgcctttttcactaaaactggaggcggcctctgagattggt
gcaagtgggcgaaatcatatgctaaaaattgtacaagggatggaagaggcaatagtggcc
aagttatctgattatgtccatggaaatttgaagtcagctgaaaaaacaattcaactgttg
gaatgctactgtaataagattctttcatggatcaatgaaacgggaggtctcgaggaagtt
ctgttgcggtttgtcattaatatatggaattgcattgaaagttgcaaagattttagcatt
caagtccaggaagaagaacttcttgatgcaaccatgatggcaatgaagcttgccattggg
agttgttcagaagaaagccagaacattataatccacaaggcttacagtgttatttcatca
agcatatccattccatttaaggaatccctggatgccacctcttccattcagcttgaagaa
ttgagcgtttctgaacagatagacaaatcttctcacagggatgaccagatagacaaattt
tctcttagagatgaatggattctttcacattttgcatcagtaatcatagcggtgcgtcca
aaagcgcagattgtgaatgtaaaaggaatattgcatttgtttatgacaaccgttcttaaa
ggttgtgttccagcagctcaggctttgggttctgtgatcaacaaattgggtacaaaatcc
aatgaaacagcaaattcaattgactgtaccttagaagaagcagtggatatgatttttaga
acaaaattatggaatctcaatgaaaatggagttttacggacatgtggatcaggtaatggc
agtaaagttggtcttactgatttatgccttggtttttcgagcaataaactgcttcgagtc
catgccattgttggactagcatggatagggaaaggtttgcttctacttggtcatgaaaaa
gtaaaagatgtaaccaaaattttgttggagtgcttactgtcagaaggcagaatatgtgcc
atggagttgaagcaaggtttgttagaaaacagttacgagcagcactctgtgatgagaagc
gcagcagatgcatttcacattcttatgagtgattctgaagtttgtttgaaccgaaaattt
catgccatagcacgaccactctacaagcagcggtttttctctacagtgatgcctattctg
cagtcttgtataataaaatctgattcatcagtatgcagatctatgctgtttcgggcatct
gcgcaccttatatctaatgctccattaattgttatcttgagtgaagccaagaagcttatg
ccagtactgttggatggattgtccctgcttagtgaagatattctggataaagataagcta
tatagtcttctgctagtgctttctggaatattgacagataaaaatggacaagtggctgtc
atagagaatgcacacattttagttaattgcctcaccagacttattgactacccgcatatg
atgcttgttagagagactgcacttcaatgtcttcttgcaacatctgagctgccatatgca
agaatctttcccatgagaacacaggtactacaagcaatatgtaaggctcttgatgatcca
aagagggctgttcgtcaggaagctgttaggtgtaggcgagcatgggcatcaattgcgtaa

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