Prunus dulcis (almond): 117623223
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Entry
117623223 CDS
T07328
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117623223
04121 Ubiquitin system [BR:
pdul04121
]
117623223
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117623223
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117623223
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117623223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
CxC4
zf-Nse
zf-C3H2C3
zf_RING_Vps8_fungal
VPS18_RING_C
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
117623223
NCBI-ProteinID:
XP_034210013
LinkDB
All DBs
Position
3:complement(4764424..4766701)
Genome browser
AA seq
321 aa
AA seq
DB search
MSSGRNTHWCYNCRRPVRLQGRDAVCPSCDGGFIQELNDMVHVSPLDFFGLDNDDDHDRR
FGFMEAFSAWQQSTDRRRSDIRGRSDIAPERNPAFTPLLIFGGQIPFRLSGNGAFEAFFN
GSPGISVTRGNVGDYFVGPGLEELFEQLSANDRRGPPPASRVSIDAMPTIKITNRHLRSD
SHCPVCKDKFELGSEARQMPCNHLYHTDCIVPWLVQHNSCPVCRQELPLQGAASGGSSNG
RSRSSSFGSNTNGREGGRENQGRRNPFSYLWPFRSSGASSSSSHTHTHTHTSNHNPTAES
SSSTMRENNNQMGYSGWPFDY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggccgaaacacccattggtgttacaattgcaggcgtccggttcgtctgcaa
gggcgagatgcagtttgcccaagctgcgatggaggatttattcaagaactcaatgatatg
gttcatgtcagtccactggatttctttggactggacaatgatgatgatcatgacaggagg
tttgggttcatggaagctttctcagcctggcagcaatcgacagacagaagacgtagcgat
atcaggggaagatcagatatagctcctgaacgtaacccggcatttactcctctgttgatc
tttggtggccaaattccttttcgactgtctgggaatggtgcattcgaagcttttttcaat
ggctctcctggaataagtgtgacgcggggtaatgtgggggattattttgtaggtcctggc
ttggaagaactgtttgagcagctttcagctaatgaccggcgaggccctcctccagcatcc
agagtttcaattgatgcaatgcctactattaagatcacaaataggcatcttcgttctgat
tcacactgccctgtttgcaaagacaagttcgagcttggatctgaagcaaggcaaatgccc
tgtaaccatctatatcacacagattgtattgtaccatggctagtccaacacaactcatgc
cctgtttgccgccaagaactgcctctgcaaggagccgcaagtggtggtagctcgaatggt
cgaagtagaagcagtagttttggtagcaataccaatggaagggagggtggtagagaaaac
caaggaaggagaaatcctttctcttatttgtggccatttcgctcatctggtgccagctct
agctctagccatacccatacccatacccatacctctaaccataacccaacagccgaaagt
agctcatcgactatgcgtgaaaacaataatcagatggggtattcaggatggccatttgat
tactga
DBGET
integrated database retrieval system
