KEGG   Prunus dulcis (almond): 117623271
Entry
117623271         CDS       T07328                                 
Name
(RefSeq) cullin-3B-like
  KO
K03869  cullin 3
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117623271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdul04121]
    117623271
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117623271
Ubiquitin system [BR:pdul04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     117623271
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117623271
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B WAC_Acf1_DNA_bd HTH_IclR
Other DBs
NCBI-GeneID: 117623271
NCBI-ProteinID: XP_034210073
LinkDB
Position
3:complement(22116158..22120060)
AA seq 733 aa
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTYHLKEISKSIEAAQGELFLEELNRKWAEHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDVVIHSSKTQARLLDTLLELVHRERSGEVINRGLMRNI
IKMLMDLGSSVYQDDFEKHFLEVSADFYRCESQEFIESCDCGNYLKKAERRLMEEMERVS
HYLDARSEAKITNVVEKEMIESHMNRLVHMESSGLVNMLVDDKYDDLGRMYSLFRRVQNG
LVIVRDVMTAYIRDTGKQLVTDPERLRDPVDFVQRLLDLKDKYDKVINLAFNNDKTFQNA
LNSSFEYFINLNARSPEFISLFVDDKLRKGLRGVSEEDVEVVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHGFYS
AVGHQLGDSPTLAVQVLTTGSWPTQPSATCNLPAEIFWVCEKFKSYYLGTHTGRRLSWQT
NMGTADLKTTFGKGQKHELNVSTYQMCVLMLFNNTDRLTYKEIEQATEIPASDLKRCLQS
LACVKGKNVLRKEPMSKDIAEDDAFFFNDKFTSKFFKVKIGTVVAQRESEPENQETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQARFLPNPVVIKKRIESLIEREFLE
RDKTDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtgctcagaagaagaggaacttccaaattgaggccttcaagcatcgggtcgtggtt
gatcccaagtacgcagagaagacctggaagatcctggagcatgcgattcacgaaatttac
aatcacaatgctagcgggcttagcttcgaagagctttataggaatgcctacaatatggtg
ctgcacaaatttggagagaaactctactctggtctggtgacaaccatgacttatcatcta
aaagaaatatctaaatcaattgaagctgctcagggagagttgtttttggaagagctgaac
aggaaatgggcagaacataacaaggcattgcagatgattcgagacatattgatgtacatg
gacaggacttttatcccaagcacccacaaaacccccgttcatgagcttgggttgaacctg
tggagggatgttgtaattcactctagcaaaacccaggctaggcttttggatacacttctt
gagcttgtgcatagagaaaggagtggtgaagtaattaacagaggcttgatgaggaatatt
ataaaaatgttaatggatttgggttcttctgtttaccaagacgactttgagaagcatttt
cttgaggtttcagccgatttttaccgttgtgagtctcaagagttcatagagtcatgtgac
tgtgggaactatttaaagaaggctgagagacgcttaatggaagaaatggagagagtgtcc
cattacttggatgctagaagtgaagctaagataacaaatgtggtggaaaaggagatgatc
gaaagtcacatgaacagactagttcatatggagagctcaggtttagttaatatgcttgtg
gatgacaaatatgatgacttgggaagaatgtatagcttgtttcgcagggtgcagaacgga
cttgtgatagtcagagatgtcatgactgcttacatccgagatactggcaaacagctagtt
actgacccagaaagattaagggatcctgtagatttcgtgcagcgtctcctggatttgaag
gacaaatatgacaaagttatcaatttggcatttaacaatgacaagacattccagaatgct
ctaaattcttcttttgaatacttcattaatttgaatgccaggtcccctgaattcatttct
ctgtttgtggatgacaagcttcggaaaggattaagaggggtcagtgaggaggatgtagaa
gttgtactggacaaggtgatgatgcttttccgttaccttcaagagaaagatgtgtttgaa
aagtattacaaacaacacttggcaaagaggcttctttctgggaaaactgtttctgatgat
gcagaaagaagtcttattgttaagctcaaaacagagtgtggatatcaattcacttctaaa
ttggagggtatgttcactgatatgaagacctctcaggatacaatgcatggattctactca
gccgttggacatcagttaggtgatagcccaacactagctgttcaggtcctcacaactggt
tcctggcctactcagccaagtgccacgtgcaaccttccagcagaaattttttgggtgtgt
gaaaagttcaagagttattatcttgggacccatactgggcggagattgtcctggcaaaca
aatatgggtacagctgacttgaaaacgacttttggaaagggccagaagcatgagctgaat
gtttccacataccagatgtgcgtgctgatgctattcaacaacactgaccggttgacctat
aaggaaattgaacaggctacggagataccagcctctgacttgaagaggtgtctgcaatct
ctggcctgtgttaaagggaagaatgttcttcggaaggagccaatgagcaaggacatagct
gaggacgatgccttcttctttaatgacaagttcacaagcaagttcttcaaggtaaagata
ggtactgtggttgcgcaaagggagtctgaaccagaaaatcaagaaaccaggcagagagta
gaggaagacaggaagccccagattgaggcagcaattgtgaggatcatgaagtcaaggcgt
gtactggatcacaataatatcgttgctgaggtcacgaaacagctgcaggcgcgattcctg
ccaaaccctgttgtaataaagaaacgaatcgagtccctcattgagcgggagtttttggag
agggataaaacagatagaaaattgtacaggtaccttgcttga

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