Prunus dulcis (almond): 117623406
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Entry
117623406 CDS
T07328
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdul03016
]
117623406
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
117623406
Transfer RNA biogenesis [BR:
pdul03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
117623406
Prokaryotic type
117623406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
DUF5978
Lipoprotein_21
Motif
Other DBs
NCBI-GeneID:
117623406
NCBI-ProteinID:
XP_034210263
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All DBs
Position
3:4510391..4516135
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AA seq
986 aa
AA seq
DB search
MPMLMPQVTNLRLLFFSPFPRLSLSSLSLKPLKPRTLFTALASSYRKRHRPIPNQSPNPG
ARNKTTLRESRGRDKAMEETKETETAGFNKRRAEGNDKNDRPKKNLQRKVRTLNPINTLS
YVQVLGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSE
TAGGLPGLLLTLAGMGEEGMSVNVWGPSDLKYLIDAMRCFIPNAAMVHTRSFGPSVGGLM
ASQTKFTEPIVLVDDEVVKISAIVLQPIFSNGAQLLNELSITQNPTEKVFNDGVDVSKPF
SPNGKNSPTGKPGDMSVIYVCELPEIKGKFDPEKAKALGLKPGSKYRELQLGNSVKSDFQ
NITVHPSDVMDPSIPGPIVFLVDCPTESHLQELLSMQCLSSYYADFSGPPENANVVTCVI
HLGPASLISNPNYQSWMKRFGSAQHIMAGHERKNVEIPILRSSARIAAQLNYLCPQFFPA
PGFWSLQHLDCLAPESTPSSEGSVSKVCESISAENLLKFTLRPYARLGLDRSVIPSQVAS
SEIIDELLSEIPEVVDAAQCVSQLWHQSTETKEEIRLTHDDKVIVEEPWFDENTLPSCLE
NIRRDDLEIVLLGTGSSQPSKYRNVSSIHINLFSKGGLLLDCGEGTLGQLKRRYGVEGAD
NAVRGLRCIWISHIHADHHTGLARILTLRRDLLKGVPHEPLLVVGPRKLKFFLDAYQRLE
DLDMQFLDCKHTTEASLHAFEGVTETNKDHSFLGSPTSFEDLIDKNTDRQVAQKVDSTLF
AKGSRMQSYWKRPGSPVDNNVVFPILKSLQKVLEEAGLEALMSFPVIHCPQAFGVVLRAS
ERLNSVGKVIPGWKIVYSGDTRPCPELTEASRGATVLIHEATFEDGMVDEAIARNHSTTK
EAIEVGNSAGVFRIILTHFSQRYPKIPVFDETHMHKTCIGFDMMSINIADLPVLPKVLPY
LKLLFRNEMIIDESDEVVDAAASVAS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgcttatgccccaagtcacaaacctccgtctcctcttcttttcccctttccct
cgtctctcattatcttccctcagtcttaaacccttaaaacctcgcactctcttcaccgcc
ctcgcttcctcctaccgaaaacgacaccgtcccattcccaaccaatctcccaatcctggt
gccagaaacaaaaccactctcagagagagtagaggcagagacaaagcaatggaggaaact
aaggagactgagactgctgggttcaataagagaagagcagagggtaacgataagaatgat
aggcccaagaagaaccttcagcgaaaagtgcgcacgctcaatcctatcaataccctatct
tatgtgcaggtactagggactggaatggatactcaggatacatctccttcggtgttgcta
ttctttgacaagcaaagatttatatttaatgctggggagggattgcaaaggttctgcaca
gagcataagattaagttgtcaaagattgatcacatatttctctctcgtgtctgctcggag
actgcaggtggacttccaggtttgctgttgactttggctggcatgggtgaagaaggaatg
tctgtcaatgtatggggtccatcagatctcaagtatttgattgatgctatgaggtgtttc
atcccaaatgctgccatggttcacactcggagctttgggccctctgttgggggtcttatg
gctagtcaaacaaagtttacagagcccattgttcttgttgatgatgaagttgtcaaaata
tcagccattgttctacaaccaattttctcgaacggagctcagctcctgaatgaattatcc
atcactcagaatcctacagaaaaggtttttaatgacggggtggatgtgtcaaaacccttt
agtcctaatggaaaaaattcacctactggaaagcctggtgacatgtctgtcatttatgtc
tgtgaattacctgagatcaaagggaaatttgaccctgaaaaagctaaagctttgggtctt
aaaccagggtctaaatatcgggaactgcaacttgggaattcagtgaagtcagattttcaa
aacatcacggttcatccaagtgatgtaatggacccgtctattcctggtccaattgtgttt
cttgtcgactgcccaacggaatctcatttgcaggagttgttatccatgcaatgtctcagt
agctattatgcagatttctcgggcccgccagagaatgctaatgttgtgacttgtgtcatt
catttgggtcctgcttctctaataagcaatcctaactaccaaagctggatgaagagattt
ggttcagcccaacatatcatggctggacatgaaaggaagaatgtggagattccgattcta
agatcgagtgcaagaattgcagctcaacttaactatctgtgtccacagttctttccagct
ccaggtttctggtctcttcagcaccttgattgcttggcaccagaatccactccttcaagt
gagggttctgtttcaaaggtttgtgaaagcatttccgctgaaaacctcctcaagttcact
ttgcgtccttatgctcgtcttggattagataggtcggttattccaagtcaggtggcgtcc
tcagaaatcattgatgagttactttcagagattcccgaggttgtagatgctgcccaatgt
gttagtcagttatggcaccagtccacagaaacaaaggaagagataaggttaactcatgat
gataaagtcatagttgaagagccatggtttgatgagaatactcttcctagttgtttggaa
aatataagaagagatgacttggagatagttcttctagggactggatcatctcagccatct
aaatatcgcaatgtcagttctatccatatcaatcttttctctaaaggaggtttactttta
gactgtggtgaaggaaccctgggacagctgaaaagaagatatggcgtagagggtgctgat
aatgctgtgagaggtcttaggtgtatttggatttctcatattcatgctgatcaccatacg
gggttggcaagaatacttactctgcgacgtgatttgttgaagggagtgcctcacgagcca
ttacttgttgttggaccgagaaaacttaaattctttttggatgcataccaaagacttgaa
gatttggatatgcagttccttgattgtaagcacaccaccgaagcttccttacatgctttc
gagggcgttactgaaacaaataaggatcactcttttctaggaagtccaactagtttcgag
gacctaatagataaaaatacagataggcaagtggcacagaaagttgattctactctattt
gctaaaggatcgcgtatgcagagctattggaagagaccgggtagtcctgttgacaacaat
gtagtctttccaattttaaagagcttgcaaaaagtgctcgaggaagcaggtttggaagcc
ttgatgagttttcctgtcatccactgcccacaggcatttggtgttgtcttgagggcttcg
gagagattgaatagtgttggaaaagtgattccaggttggaagattgtatactcaggtgat
actaggccctgcccggaacttacagaagcatctcgtggtgcaacagttcttatacatgag
gcaactttcgaggatggcatggtggacgaggctatagcacgaaaccacagcacaaccaag
gaagccatagaagttgggaactctgcgggtgtttttcgcataatccttacccacttcagc
cagcgatatccaaaaatcccagtattcgatgagacacacatgcataagacatgcatcgga
tttgacatgatgagtattaacatagccgatttgcccgtgcttccaaaagtactcccatat
ttgaaactgctttttagaaacgagatgataattgatgaatctgatgaggttgtagatgct
gctgcaagtgtagcttcttga
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