KEGG   Prunus dulcis (almond): 117623594
Entry
117623594         CDS       T07328                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117623594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117623594
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117623594
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     117623594
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 117623594
NCBI-ProteinID: XP_034210533
LinkDB
Position
3:complement(2611782..2614516)
AA seq 128 aa
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL
YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcgggccccgaagatgtctacctctccacttctcttgccagctatcttgac
aaaaaacttcttgtgctgcttcgagatggtcggaagcttttgggaattcttcgttctttt
gatcaatttgccaatgctgttctcgagggtgcatgtgagcgagtcattgtcggtgaactt
tactgtgacatccctttaggtctttatgtaatccgtggggagaatgttgttctaattggc
gagctggattcggagagagaggaacttccaccacacatgactcgtgtttcggctgcagaa
atcaaaagtgcacagaaagcagaacgagaagcgtctgatcttaaaggtaccatgagaaaa
agaatggagttccttgacatggattaa

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