Prunus dulcis (almond): 117623615
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Entry
117623615 CDS
T07328
Name
(RefSeq) uncharacterized protein C05D11.9
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117623615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117623615
03016 Transfer RNA biogenesis [BR:
pdul03016
]
117623615
03029 Mitochondrial biogenesis [BR:
pdul03029
]
117623615
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
117623615
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
117623615
Transfer RNA biogenesis [BR:
pdul03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
117623615
Mitochondrial biogenesis [BR:
pdul03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
117623615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
117623615
NCBI-ProteinID:
XP_034210554
LinkDB
All DBs
Position
3:647473..652192
Genome browser
AA seq
836 aa
AA seq
DB search
MATDGFRRLQVSSAPPRKINVQKFAESRAPELETLHTIVSNRVNNDFRSRRSKRRRTTAY
DNQAAKKRCRKKRKLGLVDQSSNALPPEKDEKNVPRRIRRRTELKMNLENGFCISGDGTK
RLRTHIWHAKRFTMTKLWGYYLPLGLQGRGRGSKAVLKWFKDGMLVHDASYHVAIQLEGP
EDSLLSVLEMVMVPSSSSASSVISGIIYDSAMLHHLGAPFSTPIAPVTYMWRPSGQPSDG
CNGLEGTENSSTFRQLWVWIHASVLTEAYHTLKLACQKEMDNRGILINCISLEGQLAKLD
VVGLKAFQLLQRTLYPTTRTRNDSWNLMKHSVSEAKDDSQSKIILEKEDSIPSYAILSLN
VKDPRTLTEKEKIAYAPESGSSSILGDVLGTERKEHVVFGRFSDEPEGSGMLAEKSLWDV
SSGVSPPVEEEVICKEKHDQHKNFLCLDDSSSGALNTSTKSPCSRSCPIMLLKNNNGRGL
NIGWSVILPLSWVRAFWISLVSKGAHAMGLREKHLISSEVGLPYFPSDFPDCNAYLCLKE
TEAVASSLKEELRPPAIRPLRVPILPPWNTIRAALNEGSTTVGGDEIFRQANGVRSNSSS
NSDSGLSDPTLAACLGNSFDGSVARTSVSLTKFLNEIQGCHLRLCPHVADKQTSFTKFMR
DESKLGLGQNGINKLKYNHKLCFVRVLLHAYKEGFLEEGAVVCAPQLTDISMWKRSESFD
GGLQMPQSAVTSYFKEQSSGKWELQIPEDAVGRESHRWPIGFVTTGFVRGSKKPVAEAFC
EAVVLNRLREEQWDSKPAKRRRKEIYVLVRNLRSSAYRLALATIVLEHQDEDVEFM
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgacggattcagacggctacaggtttcttcagctccacctcgaaaaattaat
gtccaaaaatttgcggaatcacgagctccggagcttgagacactccatacaattgtatct
aatagagtgaacaatgatttccggtctcggagaagcaagagaagaagaaccaccgcgtac
gacaatcaagcggctaaaaaaagatgcagaaagaagcgaaaacttggacttgttgatcag
agcagcaatgctttgcctccagagaaagacgaaaagaatgttcctcgtcgcattcgtcgg
agaactgagcttaaaatgaaccttgaaaacggtttctgcatatcaggggatggcacgaag
aggcttagaacacatatttggcatgcgaagcggttcacaatgacaaagctttggggttat
taccttcccctgggtttgcagggcagaggacgggggtccaaagctgtcctgaagtggttc
aaggatggaatgcttgtgcatgatgcaagctatcatgtagctatccaattggagggtccg
gaggattcattactatcagtgttagaaatggtgatggtgccttcttcctcatcagcttct
tctgttatttctggtatcatatatgacagtgctatgcttcatcatttgggagcacctttt
tcaaccccaattgctcctgtgacctatatgtggcggccttctggccaaccaagcgatgga
tgtaatggactagagggtacagagaactcttctacctttcgccaactttgggtgtggata
catgcttctgttctcactgaagcctatcatactctgaaattagcttgccagaaagagatg
gataacaggggtatcttgattaattgtatctcacttgagggtcaacttgcgaaattagac
gtagtgggattaaaagcatttcaactccttcaaaggacattataccctactacaaggact
agaaatgattcttggaatttgatgaaacattcagtttctgaggccaaagatgattcccaa
tctaagattatacttgaaaaagaggacagcattccttcttatgcaatcttgtctcttaat
gtcaaggatcctcgcacattaacagagaaggaaaagattgcatatgctccagaatcaggc
tcttctagtatactaggtgatgttctaggaactgaacgcaaagagcatgttgtctttgga
agattttcagacgagcctgaaggtagtggcatgctcgcggaaaaaagtttgtgggacgtt
agcagtggagtaagtcctccagtggaagaggaggttatttgcaaggaaaaacatgaccag
cataagaatttcctctgcctcgatgattcaagttcgggggcactaaatacttcaaccaag
tctccgtgctcaagatcttgccctattatgctgttgaaaaataataatggaaggggcttg
aatattggatggtctgttatcctccccttaagctgggtcagggcattttggatttctctt
gtctccaagggggctcatgcaatgggtttgagagagaagcacttgatttcaagtgaagtg
gggttgccatattttccttcagattttcctgattgcaatgcatatttatgcctcaaggaa
actgaagctgttgcctctagtcttaaagaggaacttcgtcctccagctataaggcctttg
agggttcccattctacccccatggaacactatccgagctgctttaaacgaaggatcaact
acagttggaggagatgaaatttttaggcaggcaaatggcgtcagaagcaattcatcatct
aactcagactctggactttctgatcctacattagctgcctgtctaggtaattcatttgat
ggttctgtagcacggacgtctgtttcgctgacaaaattcttgaatgaaattcaaggctgt
catttacgtctatgtcctcatgtggcggataaacagacaagttttactaagtttatgagg
gatgaaagcaagcttgggctgggccaaaatgggattaacaaattgaagtacaatcacaaa
ttatgttttgttagggtattactgcatgcttacaaggaaggttttcttgaagagggagca
gtcgtttgtgcacctcaactgactgacatatcaatgtggaagaggtcagagagtttcgat
ggaggacttcaaatgcctcaatcggctgtgacatcgtacttcaaagagcaatcttctggc
aagtgggaactccaaataccagaggacgctgttggtagagaatctcatcgttggccaata
ggctttgtcaccactggttttgttcgagggagcaagaagccggtagcagaagctttttgt
gaggcagttgtacttaatcgtcttagagaggaacaatgggattcgaagccagcaaagcga
agacgaaaggaaatttatgtccttgtcaggaatttgagatcttcagcatatagacttgct
cttgccaccattgttctggaacatcaagacgaagacgtggaattcatgtga
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