Prunus dulcis (almond): 117623892
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Entry
117623892 CDS
T07328
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Module
pdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117623892
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117623892
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117623892
NCBI-ProteinID:
XP_034210801
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Position
4:complement(9955950..9957950)
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AA seq
401 aa
AA seq
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MGSEFIHGITWFLFLVAICAIKAKAISVDVVKFGAKGDGKTDDTKAFTQAWTQACSERQN
NRYVIPKGTYIVGPVDFAGPCKAKTIHFKVDGTVQSSKKQSVTGGAHPNAWISFTQVNNL
FISGDGIFDGQGFEGNCTKAKQCEQPPLNLVFAMVKDSHIQGITSNNSVGGHIGIYRSIN
MTVDNVNIGIKGGEGILIEKSTNINIINTNIKILHDNCVTILDGNTGINIEKMTCSQGNG
LGVSVLGNTGKEEPIKGVTVRNCTFSHTEGAIRIQSSAASNANIAISNLVFEDIIFDYLQ
NMAIILDQEHCPSKQCRTTNPSKVKVENVSFKNIKGTSVDPRVVILECGTAPDACKDIRF
IDLRVLVVGDDRLETQFRCKNVKPAVAGHVDPAACNTRAVA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagaatttattcatggaattacctggtttttgttcttggtggcgatatgtgcc
atcaaagccaaagctatcagtgttgatgtcgttaaatttggagccaagggtgatggcaag
acagatgataccaaggctttcacacaagcatggacacaagcctgcagcgagaggcaaaat
aacagatatgtgataccaaaaggaacatatatagttggtccggttgattttgcagggccc
tgcaaagcaaaaactattcactttaaggttgacggaacagtgcagtcttcaaaaaagcag
tcggtaactggaggtgcgcaccctaatgcgtggattagtttcacgcaggttaacaacttg
ttcatctcaggagatggcatttttgatggccaaggatttgaaggcaattgtactaaagct
aaacaatgcgaacaaccgcccctaaatttagttttcgctatggttaaggattcacacatc
caaggcataacatcgaacaatagcgtcggcggtcacattggcatttaccggtcaataaac
atgacagtggacaatgttaacattggcatcaaaggtggggagggaatcctgatcgaaaag
tcaacaaacattaacatcatcaatacaaacatcaaaatccttcacgacaactgtgtcact
atcctagatggaaacactgggatcaacatcgaaaaaatgacctgctcacaaggcaatggc
cttggtgtgagtgtcctaggcaacactggcaaagaggagccgattaagggcgtgacggtg
agaaactgtaccttctcacacactgagggtgcaattaggatccagagttcggcggcttct
aatgctaatatagccatctctaatttggtttttgaagacattattttcgactatcttcag
aacatggctataatcttagaccaggagcattgcccatcaaaacagtgccgaacgacaaac
ccctccaaagttaaggtggaaaatgtgagcttcaagaacattaagggcacttccgtggac
cctcgtgtcgttattcttgagtgtggcactgctcccgacgcatgtaaggacatcaggttt
atcgacttgagagttctcgtcgtaggggatgaccgtttggagactcaatttagatgtaaa
aacgtgaagcctgctgtggctgggcatgttgatcctgctgcttgtaatacacgagctgtt
gcctga
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