Prunus dulcis (almond): 117624016
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Entry
117624016 CDS
T07328
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117624016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdul03036
]
117624016
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
117624016
SWR1 complex
117624016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
DBINO
Myb_DNA-binding
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-GeneID:
117624016
NCBI-ProteinID:
XP_034211014
LinkDB
All DBs
Position
4:7946256..7959414
Genome browser
AA seq
2144 aa
AA seq
DB search
MASKGPRSKLDHETRAKRHKALEAPNEPRRPKAHWDHVLEEMIWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKRMKEEELRLKKVALSISKDVKKFWLKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLGDSYKPVQQYPIQNQLSIQCKEMDENDINKS
TEFNADPQSDTVDGDDDYDVQSDDGTEDDECTIEEDEALFTEQERQEELAALQNEVDLPL
EELLKQYPMEKVSPESSPEKGEDVTEMASVGEDHGICPEKGDDSAEMTSVGQDPGTCSEK
VEDDAEMTSVGEDPGMCPEKVEDGAEMTSVGKDPGMCPEKVEDGTEMTSMGEDHGGQSDI
FVASKTEKISSDIFTGRRCVESNGGLSTSETHLSDIEINGAKNISEASAQLAKGHVQYDF
NDEHEDGDFILAAGEEKDDETTLSEEEELARADTSDPMDEIALLQKESEVPLEELLARYK
KDSNSDEVADGESEYASALSEGFVDSPSLEDVEPKQHGVCMDEDVDSGEHQLALDSPTEE
QSARIDKISEGGKDSENRLEDAAAAARSAQPTGNTFSTTQVRTKFPFLLKFPLREYQHIG
LDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETE
FLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLIL
DEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKD
WFCNPISGMVEGQEKVNKEVLDRLHNVLRPFILRRLKRDVEKQLPMKHEHVINCRLSRRQ
RNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSYDMAGIYTQL
SSSVCSILSPGPFSAVDLRGLGFLFTHLDFTMTSWESDEAKALATPSSSIKERVELTNLE
YIGGFKHRKKLHGTNIFEEVHKAIMEERLRQAKEHAAATAWWNNLRCNRKPIYSTSLRDL
VTIRNPVFDIHSHKANPLSYMYSSKLADIVLSPVERFQKMIDLVESFLFAIPAARAPPPV
CWCSKSGSAVLQNPVYKQKCTETLSPLLSPLRPAIVRRQVYFPDRRLIQFDCGKLQELAG
LLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPK
IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISQS
TIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRALPVKNTQKEKNHNTT
EVSLSNADLEAALKHAEDEADYMALKKVEQEEAVDNQEFTEEAIVRLEDDELVNEDDMKI
DEPVEQGGWTTSSNKENGITLNGSDSNDERAVTVACREDDVDMLDDVKQMAAAAGQEISS
FGNQLRPIDRYAIRFLELWDPIIDKTAVESQVRFEETEWELDRIEKYKEEMEAEIDEDEE
PLVYETWDADFATEAYRQQVEALTQHQLMEELEYEAKVKEDEADENCDSMNRNEMPSDPK
PKPKKKSKKAKFKSLKKRSLASELKLVKGDLQVEPMSIDEDSISYEMVTYSDMESPRSIV
KRKRKKAESRPFGEEKTSKKKSKKLKKSTLEICPSDFDTNLSTMEHDEVTESKPSESVVD
FEHKPVSRSKMGGKISITSMPVKRVLMIKPEKLKKGNIWSRDCIPPPDFWLSQEDAILCA
VVHEYGPYWSLVSDILYGMTAGGFYRGRYRHPVHCCERFRELIQRYVLSTPDNPNYEKVN
NIGSGKALLRVTEDNIRMLLNVAAEQPNREFVIQKHFTALLSSVWKVTSRKDRRKNLPSS
WNGLYSGGSFFSSSNQISQTSMKERTERMKLSTFGHGTKLIAAALNDASSRQEDGRVFRP
NLGKDSAMDAERLDITLEFQGEKDDFTDALPSVINLSVSDSDPLPLLSQATEDHHLRNSS
NDQCEDSCDVNLAENRFRTATRTCIEDTMGWAASAFPTNDIRSRSVSKPPTTGKHKLVFS
DSVRPSKSKIRKSSVEHGEMRSFITEQVFQPLPMAAPMNPIPRFDLNMPVSEDVGIDDLE
DNSFSYIDESLLETEDFGVLPHEYVPGLIGDLDDELLPEYIDIG
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaaggtccaaggtcgaagctcgatcatgagaccagagctaaacgccacaag
gcccttgaagctccgaatgaacctcgtcggccaaaggctcattgggatcatgttttagag
gagatgatatggctttcaaaggactttgagtcagagagaaaatggaaattagctcaggcg
aagaaggttgctttaagagccagcaaaggcatgctagatcaagctacaaggggagaaaaa
agaatgaaggaagaagagctgcggttaaagaaggttgccctcagtatttcaaaagatgtg
aagaagttctggctgaaaatagagaagctggtgctttacaagcatcagatggaacttgat
gagaaaaagaaaaaggcacttgataagcagcttgagttccttctagggcaaactgagagg
tactcaacaatgttggcagaaaatctcggggacagttacaagcctgtgcagcaatatccc
atacaaaatcaactgagtattcaatgcaaagagatggatgaaaatgatattaacaaatca
actgaatttaatgccgatcctcaatcagatacagtagacggtgatgatgattatgatgta
caatcagatgatggaacagaagatgatgaatgcactattgaggaagatgaggctcttttt
actgaacaagaaagacaggaagaattggctgctttacaaaatgaagtagatcttccactt
gaggagttactcaaacaatatcctatggagaaagttagcccagaaagtagtccagaaaag
ggtgaagacgtcacagaaatggcctcagtaggggaagatcatggtatttgtccagaaaag
ggtgatgatagcgcagaaatgacttctgtggggcaagatcctggtacatgttctgaaaag
gttgaagatgatgcagaaatgacctcagttggtgaagatcctggtatgtgtcctgaaaag
gttgaagatggcgcagaaatgacctcagtggggaaggatcctggtatgtgtcctgaaaag
gttgaagatggcacagaaatgacctcaatgggggaagaccatggtggacaaagcgatatt
tttgtagccagtaagactgaaaaaatcagctcagacattttcaccggtcgtcgttgtgtg
gaaagtaatggtggcttgtccacttcagaaacccatttatcagatattgagataaatgga
gccaaaaatatttcagaagcttctgcacagcttgccaagggacatgtgcaatatgatttt
aatgacgaacatgaagatggtgacttcattcttgctgctggagaggaaaaggatgatgag
acaactttatcagaggaggaggaactggcaagagcagataccagtgatcccatggatgag
attgccttactacaaaaggagagtgaagttcctttagaggaactgcttgcaaggtataaa
aaggattcaaacagtgatgaagttgcagatggtgaatctgaatatgcctctgctttatca
gagggatttgtggattctccatctcttgaagatgttgaaccaaagcaacatggtgtttgt
atggatgaagatgttgactctggtgagcaccaactggctcttgattctcctactgaagaa
cagagtgctaggatagataagatatcagaaggaggaaaggacagtgagaacagacttgag
gatgcagccgctgctgcgagatctgcacaaccaactggaaacaccttctccacaacccaa
gttcgcacaaagttcccttttcttcttaagttccctctacgtgaatatcagcatattggc
ttggattggcttgtaacgatgtatgagaaaagactgaatgggattttagccgacgagatg
gggcttgggaagacaatcatgacaattgctttgcttgcacacctagcatgtgaaaaggga
atatggggtcctcatcttattgtggtcccaactagtgttatgcttaattgggagactgag
tttctcaaatggtgtccagctttcaaaatcttaacttatttcggaagtgcaaaagagcgc
aaattgaaaaggcaaggctggttgaaaccaaattcatttcatgtatgcataacaacatac
agactggttattcaagattcaaaagtcttcaagcgtaagaagtggaaatacttgatttta
gatgaagcccatctgattaaaaattggaagtcacagagatggcaaactcttttaaacttc
aattccaaacgccgcattttgttaactggtactcctttgcagaatgatctcatggaactt
tggtctctaatgcatttcttgatgccccatgtatttcagtcccatcaggaattcaaggat
tggttctgtaatcctatatcagggatggttgaggggcaagaaaaagtgaataaggaagtt
ctagatcgtctacataatgtccttcggccattcattctccgtcgtttaaaacgagacgtg
gagaagcagctccctatgaaacatgagcatgtgataaactgtagactctccaggaggcag
cgtaacttgtatgaagacttcattgctagctccgaaacacaagcaactcttgcaagtgca
aatttttttggaatgataagtattataatgcaacttcgtaaagtatgcaatcatcccgac
ttatttgaaggtcgtccgattgtcagttcctatgatatggctggtatttacacacaattg
agttcttctgtctgttcaattctttcacctggacccttttctgcagtagaccttaggggt
ttggggtttttatttactcatctagattttaccatgacttcttgggagagtgatgaagct
aaagctcttgctactccatcaagttcaatcaaggagcgtgttgaactgactaaccttgaa
tatattggtggatttaaacatcgcaagaagttgcatggaacaaatatttttgaagaggtt
cataaggcaattatggaggagagactaagacaagcgaaggaacatgctgcagctactgca
tggtggaataacttgaggtgcaacagaaagcccatatactcaacaagcctaagggatctt
gttacaataagaaatcctgtttttgacattcactctcacaaggctaatcctttgtcctac
atgtactcctcaaagctggctgatatcgtcctttcaccagtggaacgctttcagaaaatg
attgacctggttgaaagttttctgtttgcaatccctgctgctcgggcgcccccacctgta
tgttggtgcagtaagtctggaagcgctgtgcttcagaatccagtttataagcagaaatgc
actgaaaccttgtcaccacttctatcaccactcagacctgcaattgtccgaaggcaagta
tattttcctgacaggcgacttatacagtttgactgtggtaagttgcaagagcttgcaggt
ttgcttagaaaactgaagtcagaaggtcacagagcattaatattcactcagatgacgaag
atgctggatatcttggaggctttcatcaatctgtatggttacacatacatgcgtttagat
gggtccactcagcctgaggagaggcagactttaatgcagcgatttaacacaaatcccaaa
atttttcttttcatattgtcaacccgtagtgggggtgttggaataaacctagttggggca
gatactgttatcttttatgatagtgactggaatcctgctatggaccaacaagctcaagat
cgatgccaccgtattggacagacacgggaagttcatatttatcggttgattagtcagagc
accattgaagaaaatatcctgaagaaagcaaatcagaagcgtgcgcttgatgatctagtt
atacaaagtgggggatacaacactgaattcttcaaaaagcttgatcctatggagcttttc
tctggtcatagggcacttcctgttaagaatacgcaaaaggagaaaaatcacaacacaact
gaggtttctctatccaatgctgatctggaagctgctctaaagcatgcagaagatgaagcc
gattacatggcattaaagaaagttgagcaggaggaagctgttgacaatcaagaatttaca
gaagaagccattgtgagattggaagatgatgaattagtaaatgaggatgacatgaagatt
gatgaacctgttgagcagggtggctggacgacctcttcaaacaaagaaaatggaataaca
ttgaatgggagtgattctaatgatgaaagagctgttactgttgcttgtagagaagatgat
gtggacatgctggatgatgtcaaacagatggctgcagcagcaggacaagaaatctcatca
tttggcaatcaattacgtccaatagataggtatgcaattcgttttctggaattgtgggac
ccaattatagacaaaacagcagtggaatctcaggttagatttgaggagacggaatgggaa
ctagaccgcattgaaaaatacaaggaggaaatggaagctgagattgatgaagatgaggaa
cctcttgtatatgaaacatgggacgctgattttgcaactgaggcatatcgtcagcaggtt
gaggctttgactcagcatcagttgatggaggaactggaatatgaagccaaggtgaaggaa
gatgaagcagacgaaaattgtgattctatgaacaggaatgagatgccaagtgatcctaaa
cccaagcctaagaagaaatcgaagaaagccaaatttaaatctctgaagaaacgatctcta
gcttctgaactgaaacttgtgaaaggagatcttcaagtggaacctatgtccatagatgaa
gactccatctcttatgagatggttacctattccgatatggaatcaccacgttcaattgtc
aagagaaaacgtaagaaggctgaatctagaccatttggcgaagagaagacttcaaagaaa
aaatcaaagaaactcaagaaatctactcttgaaatttgtccttcggattttgatactaac
ctctctacaatggagcatgatgaagttacagagtcaaaaccaagtgagagtgtggttgat
tttgagcataaaccagttagtagaagcaagatgggagggaaaatatctatcacttccatg
cctgtaaagcgtgttctcatgataaaaccagagaagttaaagaagggcaacatttggtct
agagattgtattccaccaccagatttttggttgtcacaagaggatgcgatattgtgtgct
gttgtacatgagtatggtccttattggagcttggttagtgacatactttatggaatgact
gctggtgggttttataggggaagatatcgccatcctgtccattgctgtgagagatttagg
gaactcatccaaagatatgttttgtctacaccggacaatcctaattatgaaaaagttaat
aatataggatctggaaaggctcttctaagagtaacagaggataatattcgaatgttatta
aatgttgctgctgagcagcccaatagagagtttgtcattcagaaacacttcaccgccctg
ctttcatctgtctggaaggtgacatctcgcaaagatcgccgaaaaaatctcccatcatcc
tggaatggtctatattctggtggaagcttttttagttcctctaaccaaatttctcagact
tccatgaaggaacgtacagaaagaatgaagttgagcacttttgggcacggtaccaagttg
atagctgctgcacttaatgatgccagcagcaggcaggaggatggcagagtctttcgtccc
aacctggggaaagattcagcaatggatgcagagcggttggatataactttggaatttcag
ggagagaaagatgacttcacggatgcattgccatctgttataaatttatcagtatccgat
tcagaccctttgcccttgttaagtcaagctacagaagatcatcatcttcgaaactccagc
aatgatcagtgcgaagattcctgtgatgtaaatttagctgagaaccgtttcaggactgca
acaagaacttgcattgaagataccatggggtgggctgcatctgcattcccaacaaatgat
atcaggtctcggtcagtgtcaaagccaccgaccacgggaaagcacaaacttgtcttctct
gattcagttagaccttccaaatcgaagatcagaaaaagttcagtagagcatggtgagatg
cgtagctttattactgagcaggtatttcaacctttgccaatggctgcacccatgaatccc
attccaaggtttgacctgaacatgcctgtcagcgaggatgttggaattgatgatttggaa
gacaattctttttcttacattgacgagtctttgttggaaacggaggactttggagttctc
ccacatgaatatgttcctggcttgattggagaccttgatgatgaactgttgccagaatat
attgacattgggtaa
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