Prunus dulcis (almond): 117624163 Help Entry 117624163         CDS       T07328                                  Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism pdul  Prunus dulcis (almond) Pathway pdul03420   Nucleotide excision repair pdul04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:pdul00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     117624163   09124 Replication and repair    03420 Nucleotide excision repair     117624163  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pdul04121]     117624163    03400 DNA repair and recombination proteins [BR:pdul03400]     117624163 Ubiquitin system [BR:pdul04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      117624163 DNA repair and recombination proteins [BR:pdul03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       117624163     TCR (transcription coupled repair) factors      Cul4-CSA complex       117624163 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st DUF6213 Motif Other DBs NCBI-GeneID:  117624163 NCBI-ProteinID:  XP_034211196 LinkDB All DBs Position 4:4593457..4603825 Genome browser AA seq 1089 aa AA seqDB search MSVWNYVVTAHKPTNVTNSCVGNFTGPQELNLIIAKCTRIEILLLTPLGLQPILDVPIYG RIATLQLFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIQFLYGCSKPTIVVL YQDNKDARHVKTYEVALKDKDFVEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC SANAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET SIASTISYLDNAFVYIGSSYGDSQLVKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVS FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVFNQLVQVTSSSVRLVSSTSRELK NEWFAPAGYSINVATANATQVLLATGGKHLVYLEIGDGVLTQKTHAQLDFEISCLDINPI GENPNYSQLAAVGMWTDISVQIYSLPDLSRITKEHLGGEIIPRSVLLCAFEGISYLLCAL GDGHLLNFILNTSTGELTDRKKVSLGTQPITLRTFSSKSTTHVFAASDRPTVIYSSNKKL LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH QEQSRTFAISSVKYNQSSAEDSETHFIRLLDDQSFDLITYYQLDAFEYGCSILSCSFSDD SNVYYCVGTAYVLPEENEPTKGRILVFTVEDGKLQLVAEKETKGAVYSLNAFNGKLLAAI NQKIQIYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEES SIEERARDYNANWMSAVEILDDDVYLGAENFFNLFSVRKNSEGATDEERGRLEVVGEYHL GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPQEQYVFLEKLQSNLRKV IKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSKMDEISKQMRVSVEELCK RVEELTRLH NT seq 3270 nt NT seq  +upstreamnt  +downstreamnt atgagtgtctggaactatgtggtcacggcccacaagcccaccaacgtcaccaactcatgc gttggcaatttcaccggacctcaggagctcaatctcatcatagcgaaatgtacacgtatt gaaattcttctacttactcctctgggcttacagcctatcttggatgtgccaatatacgga aggatagcgacactccaactttttcgacctcatggtgaagcacaagattttctatttatt gccacagaaagatacaaattttgtgttcttcaatgggatgccgaaacatctgagctcatt acaagggcaatgggagatgtctcggatcgcataggtcgtcctacagacaatggtcaaatt ggtataattgatccagattgcagattaattggactccatttgtatgatggattgtttaag gttattccttttgataataaagggcagctcaaggaggcatttaacattaggcttgaggaa cttcaagttttggatatccagtttctctatggttgttcaaaaccaaccattgtagttctg tatcaggataacaaagatgctcgccatgtcaaaacatatgaagttgcactgaaggataaa gattttgttgagggtccttgggcacagaacaaccttgacaatggggctgatttgttgata ccagttcctccaccactttgcggtgttctgattattggagaagaaacaattgtttattgc agtgccaatgcatttaaagcaatcccaataagaccttccatcacgagagcctatgggaga gtagatgcagatggttctaggtatttgcttggtgatcatgccgggcttcttcacctactt gttataacccatgagaaagaaaaggtgactggactcaaaattgagctcttgggagagact tccattgcatctactatttcataccttgataatgcatttgtctatatcggatcaagctat ggggattcacagcttgtaaagctaaatctacagccggatgcaaaaggttcatatgtcgaa gttttagaacggtatgtcaatttggggccgatagttgacttttgtgtggttgatcttgag aggcaaggccaaggtcaggtcgtaacttgttctggagcttacaaggatggttctcttcgc gtagttcgaaatggaattggaatcaatgaacaggcatcagttgagcttcaaggtattaag ggaatgtggtcattaagatcctccactgatgatcctcatgacaccttcctggttgtaagc tttatcagtgagacacgaattttggcaatgaatcttgaggatgagttggaagaaactgag atagaaggcttctgttctcaagtgcagactttattttgccatgatgctgtcttcaatcaa cttgtgcaggtcacttcgagctctgtaagactagtcagttctacatctagggagctgaag aacgagtggtttgctccagcaggctattcgatcaatgttgccactgccaatgccacccag gttttattggcaaccggaggaaagcatttagtttatttagaaattggtgatggggtattg acacagaaaacccatgcacagttggactttgagatctcatgccttgacataaaccccata ggtgaaaatcccaattatagccagctagcagccgttggaatgtggacagatataagtgtc cagatatattcacttcctgacctgagccgcatcaccaaggaacatttgggaggagagatc atacctcgttctgttcttctttgtgcctttgaagggatatcctatctgttatgtgccctt ggagatgggcacctcttaaattttatattgaacacaagtactggtgagttaacagacagg aaaaaagtctctcttgggactcaacccattacactccgtactttctcatccaagagtact acgcatgtatttgctgcgtcggataggccaactgtcatttacagtagcaacaagaagctg ctttacagcaacgtaaatttgaaagaagtcagccatatgtgcccattcaactctgctgca tttccagacagccttgcgattgctaaagaaggtgaactaactattggcacaattgatgac atccagaagcttcatatccgctctattcccttaggggagcatgcacgccgtatctgccat caggagcagtccaggacctttgccatatctagcgtgaaatataaccagtctagtgcagaa gattcagaaacacacttcatccgcttgttagatgaccagagttttgacctcataacatat tatcaactcgatgcttttgaatatggctgctccatacttagctgttccttctcagatgac agtaatgtatattactgtgtcgggacggcatatgttctcccagaagaaaatgagccaacc aaaggtcgcattctagttttcacggttgaagatgggaagctgcaactcgtcgctgagaag gaaaccaagggtgctgtttactctttgaatgcattcaatggcaagttacttgctgctatc aatcaaaagatacagatatacaagtggactctgcgggatgatggtactcgcgagttgcaa tcggaatgcggacatcacggccacatactagcgctttatgtccagactcgtggagatttc attgttgttggggatttgatgaagtcaatttctctgttaatctacaagcacgaggaaagt tccattgaggagcgagcacgtgactataatgcaaattggatgtcagctgtagagatcctt gatgatgatgtttaccttggagctgaaaacttcttcaacctcttcagtgttcggaaaaat agtgaaggtgcaactgatgaggaacgtggccgtcttgaggttgttggtgagtatcaccta ggtgaatttgtcaataggtttcggcatggctctcttgtcatgcgcttgccagactcggat gtgggccagatcccaactgtcattttcggcactgtcaacggtgtaattggagtcattgcc tcacttccccaagagcagtatgtgtttttggagaagctccagtcaaacttgagaaaggta ataaagggtgttggagggttaagccatgagcagtggaggtcattcaacaatgagaagaaa actgtagatgccaaaaatttcttggacggcgatctaatcgaatcgttccttgatctgagc cgtagcaagatggatgaaatttcaaaacaaatgcgcgtttcagtggaggagctctgcaaa agagtagaagaattgacaaggctgcattga

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