KEGG   Prunus dulcis (almond): 117624405
Entry
117624405         CDS       T07328                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117624405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117624405
   03041 Spliceosome [BR:pdul03041]
    117624405
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117624405
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117624405
Spliceosome [BR:pdul03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117624405
SSDB
Motif
Pfam: RRM_1 RRM_7 MgtE_N
Other DBs
NCBI-GeneID: 117624405
NCBI-ProteinID: XP_034211506
LinkDB
Position
4:10348072..10353822
AA seq 440 aa
MDPSKKRKLDENGVVLDTDPSSIPKLSPEDARKLIERFNPDQLIDILQDAVTRHVDVLDA
VRSIADLDASQRKLFIRGLGWDTTTEGLRALFSAYGELEEAIVILDKVTGKSRGYGFVTF
RHVDGALLALKEPSKKIDGRMTVTQLAAAGNSSSNVSSNNAADVSLRKIYVANVPYDMPA
DKLLAHFSFYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPVKNIEGRQLTCK
LAIDGKKGKPDGPGQGQGPGSGPNAHGDGMGLAQPSSIAGQYGGPGGIGSYGGFSGGHQG
PPPLGHHPLGGPGLSSVGNQVNSGLGAGGGYGAGLGGPYGNYGGPGSVGYGLGGTGGLGG
AGGGLGGAASGGGAPGGGVGTGSSLYGLAPSSAGLPSSRFPESGHYGLSSYQNQHHQQAG
TSPMPRVPPGGMYPNVPPYY
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggatccatctaagaagcgaaagctggacgagaacggcgtcgttctggacaccgacccc
tcctccatccctaaactctcccctgaagacgctcgcaagctcattgagcgattcaacccc
gatcaactcatcgacattctccaagacgccgtcacccgccacgtcgacgtccttgacgcc
gtccgatcgatcgccgatctcgacgcctcgcagcgcaagctcttcatccgaggcctcggc
tgggacaccaccaccgagggcctccgcgctctgttctccgcctacggcgagctcgaggag
gccattgtcatcctcgataaggtcaccggaaaatctaggggctacggcttcgtcacattt
agacacgtcgacggcgcgctcttagccctaaaagagccgagcaaaaagatcgacggtcgc
atgaccgtgactcagctcgcggccgcagggaattcgagctccaatgtcagctccaacaac
gcagccgacgtgtcgttgcggaagatttatgtagccaatgtgccgtacgacatgccggcg
gataagctcttggcgcatttttctttctatggggagatagaggaggggccgctagggttt
gacaagcagactgggaagtgcaaagggtacgcgctgtttgtgtataagactccggagggc
gctcaggctgcgctggtcgatccggtgaagaacatcgaggggagacaattgacttgtaaa
ttggcgattgatgggaagaagggcaagccagacgggcccggtcagggtcaaggacctggg
agtggccctaatgcgcacggggatggtatggggctggcacaaccgtcttcgattgccggg
cagtatggcgggcccggtgggattgggtcgtatggtgggttttccggtgggcaccagggc
ccacctccgttgggtcatcatccattgggtggccccgggctgtcgtctgttggaaatcag
gtgaattcgggtttgggtgctggtggtgggtatggggccgggttgggtgggccttatggt
aattacggcggtcctggttcggtgggttatggtttaggtggcactggtgggttgggtgga
gctggtggtggacttggtggtgctgcgtctggtggtggagctcccggtggcggtgtgggt
actgggtcgtctttgtatggattggcgccaagttcagctgggttgccctctagtaggttc
ccagagagcgggcactacggcttgtcgtcctatcagaatcagcaccaccagcaagctgga
acatcacccatgcctagggttccgccaggggggatgtacccgaatgtgccaccttattac
tga

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