| Entry |
|
|---|
| Name |
(RefSeq) vacuolar sorting protein 3 isoform X1
|
|---|
| KO |
| K20177 | vacuolar protein sorting-associated protein 3 |
|
|---|
| Organism |
pdul Prunus dulcis (almond)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:pdul00001]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117624442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:pdul04131]
117624442
Membrane trafficking [BR:pdul04131]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117624442
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
4:5796799..5807332
|
|---|
| AA seq |
1009 aa
MAKPELSARTVLEPLSFFNLSDHSRAQVTSLAIYTVSDSQCLIYIGTQFGALFLFSVNPG
NPNDETRSDRSNSPSVLQNISLLRKVVVGNSSVESIQVFGDIGKLLVLLGGFLFTVDSLL
LQPVKRLSFLRGISVITRRLRSSESECSNLSALSNSSEYTSTSQRFLQKLGSGIRANGLK
MKETVQQRVDNHVFSVVIGKRLVLIELVLINRVGKSDQDIDDGSFVILKEIQCIDGVMAM
VWLNDSIIVSTVNGYSLFSCVTGQSGVIFSLPDGSSLPRLKLLCKEWNLLLLVDNVGIIA
NAYGQPVGGSLVFHSKPDSIGEISSYVVVARDGKLELYHKKTGTCIQMVTFGGEGVGGPC
VVADEEDRTGNLVVVATPTKVVCFRKLPSEEQIKDLLRKKNFKEAISLVEELECEGELSK
DMLSFVHAQVGFLLLFDLHFEEAVNHFLQSEAMQPSEVFPFIMRDPNRWSLLVPRNRYWG
LHPPPAPLEDVVDDGLLAIQRAIFLRKAGVETVVDDAFLLNPPSRDNLLESAIKSITRYL
EVSREKELTPSVKEGVDTLLMYLYRALNNVYDMEKLASSANSCVVEELETLLDDSGHLRT
LAFLYASKGMSSKALGIWRVLARHYSSGLWKDPVMESGSQDGGTNIVSGKETAAAEASKL
LEESSDPGLVLQHLGWVADINQVFAVQVLTSEKRVNQLPPDEVIAAIDPKKVEIFQRYLQ
WLIEDQESYDSQFHTLYALSLAKSAIEAFQAEIASQNLDPGRIEETNISNHRTSLIFQSP
VRERLQIFLEASDLYDPEEVLDLIEGSELWSEKAILYKKLGQEALVLQILALKLENSEAA
EQYCAEIGRPDVYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVLERLSPDMPL
QLASETILRMLRARLHHYRQGRIVHNLSRALDTDASLAILEEKSRHVQINDESLCDSCHA
RLGTKLFAMYPDDTVVCYKCFRRQGESTSVTGRNFKQDVLVKPGWLVTR |
|---|
| NT seq |
3030 nt +upstreamnt +downstreamnt
atggccaagcccgaacttagtgctcggactgttctagaaccactgtcattcttcaacctc
tctgaccactctcgtgcacaagttacatccctcgctatctacacggtctctgactcccag
tgtctaatttacattgggactcagtttggagccctatttttattctctgtaaaccctggc
aatcccaatgatgaaacccggtctgatcgttccaacagcccttcagtcctgcagaacatt
tctcttttgcgaaaagttgtggtcggaaattcctcagtggagtctatacaagtatttggt
gacattgggaagcttttggtgcttttgggtgggtttttgtttacggttgattcacttctg
ttgcagcctgtgaagagattgagtttcttgagaggaatttctgtcatcacgaggaggttg
cgaagcagtgaatcagagtgttcgaatttgtcagctcttagcaattcgtcagagtatacg
agcacaagtcagcgatttttgcaaaagttgggaagtgggatcagagcaaatggcttgaaa
atgaaagaaacagtgcagcagcgtgtagacaatcatgttttctcggtcgtgattggaaaa
agattggtattgatagagcttgttttgattaatagagtaggtaaaagtgaccaagacatt
gatgatggttcttttgtaattctgaaagaaattcagtgtattgatggggttatggcaatg
gtatggctcaatgattcgataattgtcagtacggttaatggatatagtttgttttcatgc
gttacgggacaaagtggtgtaatattttcgttacctgatggttctagtctgccacgactt
aaattgttgtgtaaagaatggaatttgcttttgttggtggacaatgttggcatcatagct
aatgcatatgggcagccagttggtggtagcctggtgttccatagtaagccagattctatt
ggggagatatcttcgtatgtggttgttgcaagggatggaaagctggaattgtaccataag
aaaactggtacttgtattcagatggtcacttttggtggcgaaggggtaggagggccatgc
gttgttgcagatgaggaagatagaactggaaatcttgtcgttgttgcaacacccaccaag
gttgtttgctttcggaaattaccttctgaagaacagattaaagatctattgagaaaaaag
aacttcaaggaagccatctccttggtggaggagcttgagtgtgagggcgaattatcaaag
gatatgctctcgtttgttcatgctcaagtgggctttctcttgcttttcgacttgcatttt
gaggaagcagtgaatcactttttgcagtctgaggccatgcagccttctgaagtatttcca
ttcataatgagagatccaaatcgatggtcactactggttcctagaaaccgctattggggt
ttgcatcctccccctgcgcctctggaagatgttgtagatgacgggttgttggcaatccaa
agggcaatatttctcaggaaagcaggtgtagaaactgtggtagatgatgcatttctcctg
aatcccccaagtagagataatttgttggagtctgccatcaaatcaattactaggtatttg
gaggtttctcgtgagaaagagttgactccatcagtgaaggagggagttgacactctatta
atgtacctctatagagctttaaataatgtctatgacatggagaagctggcatcatcagca
aattcttgcgttgtggaggagttggaaactttgctagatgactctgggcatttacgtaca
cttgccttcctatatgcaagtaaaggaatgagctcgaaggctcttggtatctggcgcgtc
ttggcaagacattattcatctggcctttggaaagaccctgtcatggagagtggctcacag
gatggtggtacaaatattgtctctggtaaggagactgctgcagctgaggcatcaaagctt
cttgaggagtcttctgatccagggcttgttctacaacatcttggatgggttgcagacatc
aatcaggtttttgcagttcaggttttaacatcagagaaaagagtgaatcaacttccacca
gatgaagttattgcagctattgatccaaagaaggtagaaattttccaaaggtaccttcag
tggttaattgaagaccaagaatcgtatgacagtcagttccacacattatatgctctctca
ctggccaagtcagcaattgaagcttttcaagcagaaattgcttctcaaaaccttgatcct
ggaagaatagaagagacaaacatttctaatcataggacaagtttgatctttcaaagtcct
gttcgggaaagactgcagatatttttagaggcttccgacttgtatgacccagaggaggtt
cttgacttgattgagggatcagaattgtggtcagagaaggctattctttataaaaaacta
gggcaagaggcattggtgctccaaattttggccttgaagctggaaaacagtgaagctgct
gagcaatattgtgctgagattgggaggccagatgtctatatgcagttacttgatatgtat
ctggatccacaagatggtaaagagcctatgtttaaagcagctgtacgactacttcacaat
catggtgaatcattggatcctttgcaagttttagagagattgtcccctgatatgcccctt
caacttgcgtctgaaactatattaagaatgttgagagctcggcttcatcattaccgtcaa
ggacgtattgtgcataatctgtcccgtgctctagatactgatgcaagtttagcaatattg
gaggaaaagtcgaggcatgtgcagatcaatgatgaaagcctttgtgattcttgccatgca
cggcttggaactaaactttttgctatgtacccagatgacaccgtagtctgttacaagtgt
ttccgtcgtcagggtgagtctacttcagtcactggtcgcaactttaagcaagatgtccta
gtaaaaccaggttggcttgtgacccgataa |
|---|
