Prunus dulcis (almond): 117624595
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Entry
117624595 CDS
T07328
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117624595
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdul01007
]
117624595
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdul03016
]
117624595
Enzymes [BR:
pdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
117624595
Amino acid related enzymes [BR:
pdul01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117624595
Transfer RNA biogenesis [BR:
pdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117624595
Prokaryotic type
117624595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117624595
NCBI-ProteinID:
XP_034211830
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All DBs
Position
1:39178991..39182953
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AA seq
520 aa
AA seq
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MGLGGTTLQTLKLATIPTPSSSSLRSVFKPLSQSFLYRHSRRRPALQLFFVRGLSAPAVQ
ATATATPKTTSPDENGMKQQWKAAIDFKWIRDNKDAVAANIKKRNSNANLEHVLELYHKM
LNLQKEVEQLRGERNVVANKMKGKLESSERQRLIEEGKNLKEGLLSLEEDLLKLTDELQQ
EAQCIPNMTHPDVPIGGEDFSTIRKMVGTPHEFSFPVKDHLQLGKELDLFDFDAASEVSG
SKFYYLKNEAVMLEMGLINWTLLEVMKRGFTPLTTPEIVRSSIVEKCGFQPRGANTQVYS
IEDSDQCLIGTAEIPVGGIHMDSIIAASLLPLKYVAVSHCFRTEAGAAGTASRGLYRVHQ
FSKVEMFILCRPEESDFYHEELIRIEEDLFSSLGLHYKTLDMASGDLGAPAYRKFDIEAW
MPGLARFGEISSASNCTDYQSRRLGIRFRSSEPALTNPKKGKSNLAPPQFVHTLNATACA
VPRMIVCILENNQQEDGSVIIPEPLRPFMGGLEFIHPKPR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgggcgggacaaccttacaaaccctgaagctcgctacaattcctacaccttct
tcatcttctttgcgttccgtctttaaaccattatcccagagcttcctctaccgccatagc
cgtagacgacctgcacttcagctcttcttcgtcagaggtctttcagccccggccgtacaa
gccactgccaccgcaacaccaaaaacaaccagcccagatgaaaatggtatgaaacagcaa
tggaaagcagcgatagacttcaagtggataagggacaacaaggacgccgttgctgccaac
ataaagaagaggaattccaatgccaatttggaacatgtgcttgagctctaccacaaaatg
ctgaatcttcaaaaggaagttgaacagcttcgcggggaaaggaatgtggtggcaaacaag
atgaaagggaagttggagtcatccgagcgtcaaagacttatagaggaaggaaagaatctc
aaggaagggctactttctttggaagaagacctgcttaaacttactgatgagcttcagcaa
gaagcacaatgtataccaaatatgactcatccagatgtcccgattggtggggaggatttt
tcaaccataagaaagatggtaggcaccccacatgagtttagctttcctgtcaaggatcat
cttcaacttggaaaggaactagatctctttgattttgatgctgcgtcggaggtcagtggc
tcaaagttctactatctaaaaaatgaagcagtgatgctagagatgggccttattaactgg
acgctcttggaagtgatgaagaggggcttcacacctttaacaaccccagaaattgtgaga
tcctccattgttgaaaaatgtggtttccaaccccgaggagcaaatacccaggtctattct
atcgaggatagtgatcaatgcctcattgggactgcagagattcctgttgggggaattcat
atggattctattattgctgcatcgttgttacctttgaaatatgtggcagtttcccattgc
ttccgtactgaggcaggcgctgctggtacagcatcaaggggtctgtaccgagtccaccaa
ttcagcaaggtggagatgtttatattatgccgaccagaggagagtgatttctaccatgaa
gagctcataagaattgaagaagacctattctcatcactaggattacattataaaactttg
gacatggcatctggggatttaggtgcacctgcttatcgtaaatttgatattgaggcttgg
atgcctggtttagcgagatttggtgagatatcaagcgcatcaaactgtacagactatcaa
agccgtcgtcttgggatcaggtttcgttcttcagaaccagcactaacaaatcctaagaag
ggtaaaagcaaccttgctccaccacaatttgttcacacattaaatgcaacagcctgtgca
gtgccacgaatgatcgtatgcatacttgagaataaccagcaagaagatggttctgtcatt
atccctgagccattgaggccctttatgggtggacttgagtttatacatcctaaacctaga
tag
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