KEGG   Prunus dulcis (almond): 117624626
Entry
117624626         CDS       T07328                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117624626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdul03041]
    117624626
Spliceosome [BR:pdul03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117624626
 Complex B
    117624626
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 117624626
NCBI-ProteinID: XP_034211877
LinkDB
Position
4:complement(2260300..2265254)
AA seq 525 aa
MSDYEGTKHNSRRSERESSWTRERERDRGQDREKDDDRYTRDYKDRSGRFDRGRNKFNGY
RRNRTQDFDRHRDYDQDRERRHRHRSRSRSHSRERSPSHSRSKSKRTSGFDMAPPAGAVL
PNAAVSGQLSGIPQTMQGVVQNVLPFGAAHLALPLMPAQAMTQQATRHARRVYVGGLPPL
ANEQTIATFFSQVMAAIGGNSVGPVSELAGDAVVNVYINHEKKFAFVEMRTVEEASNAMA
LDGIIFEGVAVRVRRPTDYNPTLAAALGPSQPSPLLNLGAVGLTQGSAVGGAEGPDRIFV
GGLPYYFTEAQIRELLQSFGPLRGFDLVKDKDTGNSKGYGFCVYQDPAVTDIACGALNGL
KMGDKTLTVRRATASNGQSKSEQENILVQAQQHIAMQKMALQVVDLNLLGGGMATMASGE
TPTKVLCLTEAITADQLGDDEEYVEILEDMRDECSKFGTLVNVVIPRQDQHGEHISGVGK
VFLEYSDTGSCANARNVLSGRKFGGNIVNAFYYPEDKYHSRDFSA
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtctgattacgaaggcaccaagcataattctcgtcgatcagaacgcgagagctcatgg
actagagagcgagagcgagaccgcggtcaagatagagaaaaagatgatgaccggtataca
agggattacaaggatagaagtggaagatttgacagagggaggaacaagtttaatggctat
cgccgcaatcgaactcaagatttcgacaggcatcgtgattatgatcaagatagagaaagg
aggcatagacatagatcgcgttctcgttctcattcaagggagagatctccttcccattct
cgttcaaagagcaagcgtacaagtggttttgacatggcaccacctgctggggccgtgctg
cctaatgctgctgtttcaggacaactgtcaggtattccacaaacgatgcagggagtggta
caaaatgtattaccttttggggcagcgcatctggctcttcccttgatgccagcccaagcg
atgactcagcaggctacaaggcatgcacgtcgggtatatgttggtgggcttccccccttg
gcaaatgagcagacaattgccacattctttagccaagtcatggctgccattggagggaat
tctgttggtccagtatctgaacttgcaggtgatgcggtggtaaatgtctacattaatcat
gaaaaaaagtttgcatttgtggagatgagaacggttgaagaagcgagtaatgcaatggca
ttagatgggattatattcgagggggttgctgtgcgggtacgaaggccaacagactataat
cctaccttagcggcagcacttggtccaagccaaccaagtcctctcctcaacttaggtgct
gttgggctcacacaaggcagtgctgttggtggagcagagggacccgaccgtatctttgtg
ggtgggctaccatactacttcactgaagcacagattagagagttgctacaatcctttgga
cctctccgtggttttgaccttgtgaaggataaagacacaggaaactctaaaggatatgga
ttctgtgtttatcaggatccagctgtgacagacattgcctgtggtgctcttaacggctta
aaaatgggtgataaaactttaactgtcaggcgtgctactgctagcaatgggcagtctaaa
tcagaacaagaaaatatcttggtacaggcacaacagcatatagccatgcagaaaatggcc
ttgcaggttgttgacttgaatcttctaggaggtggaatggcaaccatggcaagtggtgaa
acacccactaaagtcctatgcttgactgaggcaattactgccgatcaattaggtgatgat
gaagagtatgtagaaatattagaagacatgagggatgaatgcagcaaatttggaactctg
gtgaatgttgttattcctcgtcaggatcaacatggagagcatatctcaggagttggaaag
gtgttcttggaatattctgatactgggagttgtgccaatgcaaggaatgtcctcagtggc
agaaaatttggaggcaacatagtgaatgccttttattatccagaagacaaataccatagc
agggactttagtgcgtaa

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