Prunus dulcis (almond): 117624631
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Entry
117624631 CDS
T07328
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03440
Homologous recombination
pdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117624631
03460 Fanconi anemia pathway
117624631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117624631
03036 Chromosome and associated proteins [BR:
pdul03036
]
117624631
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117624631
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117624631
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117624631
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
117624631
FA (Fanconi anemia) pathway
Downstream FA components
117624631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
117624631
NCBI-ProteinID:
XP_034211884
LinkDB
All DBs
Position
4:complement(24034237..24042802)
Genome browser
AA seq
1091 aa
AA seq
DB search
MSTWQMFADAGNNYRWYPDTPNGVVYPTTTLHSDSERQQQLKSSSRLPSMADLLLQGCSK
LAEAQTQNQRNGFDADDGVGMFRNGFGRPVVIKPSSLAKASSLLQTGTGQVQATNSRGGF
SNSLFQTGSGKMVNISPDGLVRAKTLLGLGDDNDHSKLPGSNSGGVAMDAASISRSPLIN
KTVSVQTRCKKNEADLNFKSPERLNLTPDKPSSIKFHTAGGRSISVSTDALQRARSLLGE
PELGSFLNEGDAGDSVFSFSKGTGHDERTPFSHQKMTRKNFLTKTSVSPLQSSSNQVRSL
SAINSSTNLITQFDVVSNESVCKSNSELPYRQEKPLSDKHCIINTVENNYLENGGSLRIN
PVGKSIAKPLVDVSNTVGTTAMNSTQKSGVKRRLGRSSISPFKKPRTSNSPTPLHKNVPL
VRNGLSTLSSDHSCSKRRVSTRYPFSVTRMYVKKYFGMPPPDQNMFECLSDPGRRITASN
AEKYMFLDESGLNCIGAEAFVHMLACSGALMQYTSREWVTNHYKWVVWKLACYERCHLAK
SFGNFLTVSNVLEELKYRYEREVNHGHRSAIKRILEGDASPSSMVVLCISAIRSNCDPNM
ETSSRAENSGAAKVELTDGWYSVDAVLDAILSKQLASGKLFVGQKLRIWGAALCGWAGPV
SPLEVARTVTFRLHINGTYRAHWADRLGFCKGAGAPLAFNCVKSGGGAVPCTLLGVTRIY
PVLYKERLSNGRSVVRSERLESQMVQSYQERRSNVIEGIISEFQRGLEHSHLCNDSDSEG
AKLLKILETATEPEILMAEMSSEQLKSFTKYRSKLEAIKQSDMEKSILKALEDAGLSERE
VTPFMRVRVVGLTRKLCHGKDSSKEGLITIWNPSEKQQKTELVEGRAYRVSGLIPTSSDV
GTLHLLVRGSTTTWQPLSQQAVEHFKPFFNPRKSVLLSDLGKVPLSSEFDIAAFVVFVGE
VYIAAHQKKQWVFVTDGSISELNSEESCDSLLAVCFCSPYTGVDSIAPINYNLTGSTVGF
CNLTKREKDQMNSLWVAEATETSAYFLSFDTPHCSHLKGAAVSTERWGRISSLTINRLKE
RVLCIIGASKG
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatgttcgccgacgccggcaacaattaccggtggtatcccgacaca
ccaaacggcgtcgtttatcctactactactcttcatagtgatagtgaaaggcagcagcag
ctcaagtcgagcagtcggctgccttccatggcggatctgctgcttcaaggttgttcgaag
cttgcagaggcccagactcagaatcagagaaatggctttgatgctgatgacggtgttggg
atgtttcgcaacggatttggaagacccgtcgtaatcaagccatcctccttagccaaagcg
tcgtcgcttcttcaaactggaactggccaagtgcaagctacgaatagtagaggtggtttc
tctaattcccttttccagactggctctggtaaaatggttaatatatctccggacggtctt
gtgcgggcaaagacattgcttggtttgggagacgacaatgatcacagcaagcttccgggt
tccaacagtggtggggtggctatggatgctgcatccatttcaaggtctccgttaattaat
aagactgtttcagtacaaactagatgcaagaagaatgaggctgatctaaattttaagtcg
cctgaaaggcttaatttaactccggacaaaccttcatcaatcaagttccatacagctgga
ggaagatctatatctgtttctactgatgcactgcaacgtgcaaggagtctacttggtgaa
ccagagttggggagtttcttgaatgagggggatgcaggtgactccgttttctcattttca
aaaggtacaggacatgatgaacgcactcccttctcccatcagaaaatgactaggaaaaac
tttttaactaagacttctgtatctccactgcaatcatcgtctaatcaagtgcggtcgttg
tcggctataaattccagcactaatctgattacacaatttgatgttgttagcaatgaaagt
gtctgtaagtcaaacagtgagttaccttatcggcaggagaagccccttagcgacaaacat
tgtatcatcaacacagtagaaaacaattatttggaaaatggtggtagtttgaggattaat
cctgttggaaagtcaatagccaagccattggttgatgtttcaaataccgttggcaccact
gctatgaatagcacacaaaagagtggtgtaaagaggaggcttggaagaagttctatttct
ccattcaagaagcctcgcacttccaactcccccactccattgcacaagaatgttcctctt
gtccgtaatggtttgtctactttgtcctccgaccattcgtgttccaaaagaagggtttct
actagatatcctttctcggtaactagaatgtatgtgaagaaatattttggaatgccacca
cctgaccagaacatgtttgagtgtttgtcagacccggggagaagaattacagcaagtaac
gcagaaaagtacatgtttcttgatgaatctggcttaaactgcataggagcagaagctttt
gtccacatgttggcttgttctggagctttaatgcaatatacttccagagagtgggtcaca
aatcactacaagtgggttgtctggaaactggcttgctatgagagatgtcatctagctaag
tcgttcggaaattttttgacagtctccaatgtgcttgaggaattgaagtatagatatgaa
agagaagtgaatcatggtcaccgatctgcaattaagaggattctggaaggagatgcatcc
ccttcttcaatggtggttctatgcatttcagctattcgttcaaattgtgacccaaatatg
gagactagctccagagctgaaaatagtggtgctgcaaaagttgaacttactgatgggtgg
tattcagtggatgctgtactggatgcaatcctgtcgaagcagcttgctagtggaaaattg
tttgttggacagaaacttcggatctggggagcagcactctgtggttgggctgggcctgtt
tcaccccttgaggtggcaagaacagttactttccggctgcacataaatggaacatataga
gctcattgggctgatcgattgggattttgtaaaggtgctggtgctcccttagcatttaac
tgtgtcaagagtggtggtggtgcagtcccttgcactcttctaggagtcacacggatatac
cctgttctctacaaagagaggttaagtaatggaagatctgttgtaagatcagagaggttg
gagtcccaaatggtgcaatcataccaagagaggcgctctaatgtcatagaaggcattata
tctgagttccaaagaggactagaacattcacatttgtgtaatgatagcgatagtgaagga
gcaaaactcttaaagattctagaaacagccactgaacctgaaattttaatggcagaaatg
agttcagaacagttgaaatcttttaccaaatatcgatcaaaactggaggcaattaagcag
tcagacatggagaaatcaattttgaaagcactggaagatgccggcttaagtgagagggaa
gtcacgccattcatgagggtgagggtggttggactaacaagaaaattatgtcatgggaaa
gacagttctaaagaaggcctaataacaatctggaacccatcggagaagcagcagaagact
gagctggttgagggacgtgcatatcgtgtttctggacttataccaacaagttctgatgtg
ggtactctacacttgctagtgagaggatccacaacaacatggcagcctttatctcagcag
gcagtcgaacactttaagccttttttcaatcctcgcaaatcagtcttattgtcagatttg
ggtaaagttcctctttccagtgaatttgatattgctgcatttgttgtgtttgtgggggag
gtttatatagctgctcaccagaagaaacagtgggtgttcgtgacagatggctccatatct
gaattaaattcagaagaatcatgtgattctctacttgccgtctgcttctgttcaccatac
actggcgttgattcaattgctcctataaactataacctcacaggatcaacggttgggttt
tgtaatcttaccaagagagaaaaggaccaaatgaattccctttgggtagcagaagctaca
gaaacttcagcttactttttaagttttgacactccacattgttctcatctcaaaggtgct
gctgtctccacagaaagatggggaaggatctctagcttgactatcaataggcttaaggag
agggttctgtgtattattggtgctagcaaaggatag
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