KEGG   Prunus dulcis (almond): 117624690
Entry
117624690         CDS       T07328                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03020  RNA polymerase
pdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117624690
  09124 Replication and repair
   03420 Nucleotide excision repair
    117624690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdul03021]
    117624690
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117624690
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117624690
Transcription machinery [BR:pdul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117624690
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117624690
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117624690
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Sod_Cu Vg_Tdu
Other DBs
NCBI-GeneID: 117624690
NCBI-ProteinID: XP_034211985
LinkDB
Position
4:16669654..16672544
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR
DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttcttccatatagtgttggaaagaaacatgcagcttcatcctcgtcactttggccgc
aatctccgtgaaaatctcgtggccaagctcatgaaagatgttgaaggcacttgcagtggt
caacatgggtttgtggttgcaattacgggcatagaaaacattgggaaggggctgattcgc
gatgggacagggtttgtctcattccctgtgaagtaccagtgtgttgtttttagaccattc
aaaggagagatcttagaagctgttgttactatggtgaacaagatgggattttttgctgag
gctggtcctgttcaaatctttgtttcaaaccatttgataccggatgatatggagttccaa
tctggagatatgccaaattatacaacatcagatggatcagttaagattcagaaagatagc
gaagttcggttaaagataattggaacccgagtagatgctacagaaattttctgcattggt
acaataaaggatgatttcttgggtgtgataaacgatcctgcgactgcttag

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