Prunus dulcis (almond): 117624969
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Entry
117624969 CDS
T07328
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117624969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117624969
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117624969
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
LRR_4
LRR_6
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
117624969
NCBI-ProteinID:
XP_034212405
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Position
4:1883800..1888280
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AA seq
585 aa
AA seq
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MGSKRSKSDSPDPDEPNRVGSDFPDEVLEQVLGMVKSRKDRSSVSLVCKDWYDAERWSRR
QVFIGNCYSASPEIVTRRFRSIRSVTLKGKPRFSDFNLVPPNWGSDVQPWLEVFASEYPL
LEELRLKRMTVTDESLEFLAVSFPGFKALSLLSCDGFSTDGLAAIATHCKNLTELDIQEN
AIDDRSGGWLSCFPETFTSLEILNFASLNSDVNFDALEKLVRRCKSFKVLKVNKNVTLEQ
LQRLLTHAPQLLELGTGSFMQELTACQNSQLERAFSNCNNLHTLSGLWEATALYLPALYP
ACTNLTFLNLSYSALQSWELAKLLAHCPRIRRLWVLDTVEDKGLEAVGSNCPLIEELRVF
PSDPYGDDIIHGVTESGFVAVSYGCRRLRYVLYFCRQMTNAAVATVVKNCPDFTHFRLCI
MNPGQPDHISNEPMDEGFGAVVKTCTKLQRLAVSGLLTDRTFEYIGEYAKNLETLSVAFA
GKSDWGMQCVLNGCPKLKKLEIRDCPFGNAALLSGFEKYESMRSLWMSACNVTMNACRLL
ASEMPRLNVEVMKDDGNDDDQADKVYVYRSVAGSRRDAPPFVLTF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgaaaagaagcaagtccgattcaccggacccggacgagccgaaccgggtcggg
tcggattttccagacgaggttttggagcaggtcctcggcatggtgaagtcccgcaaggac
cggagctcggtctcactggtgtgcaaggactggtacgacgcggagcggtggtcccgccgc
caagtgttcatcggaaactgctactcggcgtcgccggagatagtgacccggcgatttcgg
agcatccggagcgtgaccctgaaagggaagccccggttctcggacttcaatctggttcct
ccgaactggggcagcgatgttcagccttggctggaggtgtttgccagcgaatacccgctt
ctggaggagctgaggctgaagaggatgacggtgactgatgagagccttgagttcttggct
gtttcgtttcctgggttcaaagctctctcgcttctcagctgtgatgggttcagcacagat
ggcctcgcagccattgccactcactgcaagaatttgactgagctggacatacaggagaat
gcaattgatgatagaagtggcggatggctaagttgcttccccgaaactttcacatctttg
gaaatactaaactttgccagcctcaatagcgatgtcaatttcgatgctcttgagaaactt
gtacgcaggtgcaaatcatttaaggtgttgaaggttaataaaaatgtaaccttggaacag
ctacagaggcttcttacccatgctcctcagcttctggagctaggcactggctcatttatg
caagagctcaccgcctgtcagaattcacaacttgaaagagcatttagcaattgcaataat
ttacacacgctctctggtttatgggaagcaacggccctttatcttccagctctgtatcct
gcatgtacaaatctcactttcttgaatttgagttattctgctttgcaaagttgggaactt
gctaagcttcttgctcattgcccacgtatacggcgactttgggtcctggacacagtggaa
gacaaagggttggaggctgtcggatctaactgtcctttgatcgaggaactccgtgttttc
ccttctgatccttatggtgatgatattatccatggggtgactgaatctgggtttgttgct
gtgtcttatggctgccgaagactccgttatgtcctctacttttgtcggcagatgactaat
gcagctgtagcaactgttgtaaaaaactgccctgatttcacccactttcgtctctgtata
atgaacccagggcaaccagatcacatatcaaatgagcccatggatgagggttttggtgca
gtggtgaagacttgcactaaactccaaaggcttgcagtttcaggtttattgaccgaccgc
acatttgaatacattggagaatatgctaagaatttggaaacgctttcagtagctttcgct
ggaaaaagtgattgggggatgcagtgtgtgctgaatggttgtccaaagctcaagaaactt
gagataagagactgcccattcgggaatgcggctttgctctcaggttttgagaagtatgaa
tctatgagatcactttggatgtcagcctgcaatgtgacaatgaacgcatgtcggctattg
gcaagtgagatgccaagattgaatgttgaggtaatgaaggatgatgggaatgatgatgat
caggctgataaagtctatgtttaccgttctgttgctgggtcaagaagggatgccccacct
tttgttctcactttctga
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