KEGG   Prunus dulcis (almond): 117624986
Entry
117624986         CDS       T07328                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117624986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117624986
   03041 Spliceosome [BR:pdul03041]
    117624986
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117624986
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117624986
Spliceosome [BR:pdul03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117624986
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 FANCI_S1-cap AbiGi
Other DBs
NCBI-GeneID: 117624986
NCBI-ProteinID: XP_034212431
LinkDB
Position
4:3079795..3083455
AA seq 381 aa
MDFTKKRKTELNGTVSLSPTSQSSSLTSEDARKLLQPLTQDQLIDILQNAVVRHPDVLDS
VRSVTDKDSTLRKLFIRGLGADTTSDSLRSLFSAFGDLDEAIVIPDKATGKSKGYGFVTF
KHADSALLALKEPSKKIDGRVTVTQFAAAGLTASFSNSNSNAADVSARKIYVGSVPFDIS
SERLLSTFSAYGEIEEGPLGFDKATGKSKGFAFFVYKTEEGARAALVEPIKNIDGHQVAC
KLAVDNKKSKPGGAQAAPIDNSGVPPPQSSMPPGLYQGPPPHQQGPYSGYPGGHQPLPGL
PGNSFGARYNANLGGAYGLPPPGEFTARLPPSSIGMGHGGYSDGPHYGLGASMGLPSQHQ
QPPPVPRVPPGGLYQGMPPYY
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggacttcacgaagaagcgcaaaactgagctgaacggcaccgtatcactatctccaact
tcccaatcgagttctctcacctcagaagacgcccgcaagctcctccaacccttgacccag
gaccagctcatcgacatcctccaaaacgccgtcgtccgccaccccgacgtcctcgactcc
gtccgctccgtcaccgacaaagactctaccctccggaaactcttcatccgcggcctaggc
gctgacaccacctccgactccctccgctctctcttctccgccttcggcgacctcgacgag
gccatcgtaattcccgacaaggccaccggaaaatccaaaggctacggcttcgtcacgttc
aagcacgccgactcggcccttctcgctctcaaagaaccgagcaagaaaatcgatggtaga
gtcactgtgacgcaattcgccgctgccggcttgacggcgtcgtttagcaacagcaactct
aacgccgccgatgtctccgccaggaagatttacgtgggaagcgtaccgtttgatatctct
tcggagagactgttgtcgactttctcggcgtacggagagattgaggaaggaccgctaggg
ttcgataaggccaccggaaaatcaaaggggtttgctttctttgtgtacaagactgaggag
ggtgccagggctgcacttgttgaacccataaagaacatcgacggtcatcaggtggcttgc
aaattggcggtggacaacaagaagagcaaacctggtggggcccaagcagctcctattgat
aactccggcgtccctccaccgcaatcttcgatgccaccggggttgtatcagggcccgccg
ccgcatcagcagggtccatattctggttatcctggcgggcatcagcctttgcctgggctg
cctggtaatagtttcggtgctaggtataatgccaatttgggaggtgcatatggtttgccg
cctccaggtgaattcacagctcggttgccgccaagttctataggaatgggtcatggaggg
tattcggatggtccgcattatggtttaggagcatccatggggcttccttctcagcatcag
cagcctcctcctgtacctagagtcccgcctggtggactttaccagggcatgccaccatac
tactga

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