Prunus dulcis (almond): 117625035
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Entry
117625035 CDS
T07328
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117625035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117625035
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117625035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
117625035
NCBI-ProteinID:
XP_034212488
LinkDB
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Position
4:complement(15433679..15437355)
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AA seq
479 aa
AA seq
DB search
MKRMEPDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAVIMRDRATGRARGFGFVVFADP
AVAERVIMDKHMIDCRTVEAKKAVPKEDQNILNRTGVAHGSPGPGRTRKIFVGGLASTVT
ESDFKKYFDQFGTVTDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEV
KRAVPKELSPGPTRSPLIGYNYSPGRTSGLLNGYAQGYNMSPIGGFGISMDTRFNPLSSG
RSGLSPFGTTGYGLGMNLEPGLSPNYGGNSNFGNSLGYARMLSPYYNANSNRYATPIGYN
AGNGRSSSVVSSTNRNVWANSGINNNINPASTGGYLSSENGGFGVAIGNNDSNWGPNSFS
TQSRGSASGYTSAGGYGSGESSFGLGGGGYGRNSGTGVAPTSSFPTSTVGYEGSYGDLYH
SDSVYGDSTWRSTSPELDGSSTFGYGLGDLPADISAKSSGGYIGSYNVTSRQPNRGIAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggatggaaccagatcttggcaagctcttcattggcgggatttcctgggacaca
gatgaggaacggctcaaagaatatttcaggaaatatggagaggtggtggaggctgtgatc
atgagggatcgtgcaaccggtcgtgctcgtggctttggtttcgttgtctttgcggatcct
gcagttgcagaaagagtcattatggataagcacatgatcgattgccgcacagtggaagca
aagaaggctgttcctaaggaggatcagaacattttaaacagaactggggttgctcatggt
tcccctggtcctggacgcacgagaaagatttttgttggaggtttagcatccacagtcact
gagagtgactttaagaagtactttgatcaatttggtacagtcactgatgttgtagtaatg
tatgatcacaacacccaaaggccgagaggcttcggattcatcacttatgactcggaggag
gcagttgacagagttctgcataaaacatttcatgaactcaatggtaagatggttgaggtc
aagagggcagtccctaaggagctatctccagggcccacccggagccctctgataggatac
aactatagtccaggtaggaccagtggtttgcttaacggttatgctcagggttataatatg
agcccaattggaggttttggcatcagtatggatacaaggttcaatccactttctagtggt
cgtagcgggttgtctccatttggcactactggatatggactgggtatgaatttagagcca
ggattgagcccaaactatggcgggaattccaactttggcaatagtctaggatatgcacgg
atgttgagcccctattataatgccaattcaaacaggtatgctacccctattggatataat
gcgggtaatggaaggagcagttctgtagtaagctcaactaatcggaatgtctgggcaaac
agtggcatcaacaataacataaaccctgccagtactgggggttacttgagttctgaaaat
gggggctttggagttgctataggaaataatgattcaaattggggccccaattctttttca
actcaaagtagaggcagtgcttctggatatactagtgccggtggttatggtagtggagaa
agcagctttgggttgggaggaggaggatacggaagaaacagtggtactggggttgcccca
acatcatcatttcccacatcaactgttggttatgaggggtcttatggggacttgtaccat
agtgattcagtttatggtgactcaacttggcgctctaccagtcctgaactagatggttct
agcacatttggttacggcctgggtgatttacctgcagacatcagcgccaaaagttctggg
ggctatattggaagttacaatgttaccagtagacaaccaaatagaggaattgctgcttag
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