Prunus dulcis (almond): 117625159
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Entry
117625159 CDS
T07328
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117625159
Spliceosome [BR:
pdul03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117625159
Other components
Complex C specific factors
117625159
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117625159
NCBI-ProteinID:
XP_034212657
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All DBs
Position
1:complement(43774489..43782595)
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AA seq
889 aa
AA seq
DB search
MDDYQEMERFGMEKDYEDGQWIGGEFYYRKRKDKRVQTKDDVLYGIFSADSDDDDEDNEG
SRKRRKDRKVVDLTKPVNFVSTGIVVPNQEMDNNSKQQNDDLGATGVATSGLGFGVATAS
GLGFNNLNSGLGFNSNSDPTGGEEEDEENDSNFLPTAFGKKIKEGAERRQKEREKLKLLK
QTTIQSRSRRDSEESQFGLGGASGGGGDGGLGAFEKHTKGIGMRMLKNMGYKGGGLGKNQ
QGILAPIEAKLRPKNMGMGFNDYEETKIKRPGLQELEAEKPSKPLPAVSSSTTTKKSLSW
KKAVANRANKDHYVSAKELLAKKQEESTEVFVHKVVDMRGPQVRVLTNLENLNAEEKARE
EDIPMPELQHNLRLILDLAELDIQKIDRDLRNERDTAISLNQEKERLATEVARQKQHLDS
LGDIMNVLDRLGEENIMGALTLDSLAKDFGDLQKRYADDYKICNLSCIACSFAIPLFIRM
FQGWDPLRNPSHGLNVVSSWKGLLHGEGEREQYLDIWDNTMPPYTQLVSEVVLPAVRIAG
VNTWQAKDPEPMLRFLESWEKLLPSSVLHAILDMVVFPKLKDAVDLWEPHRDTVPIHVWV
HPWLPLLGHKLEELYHTIRFKLSNVLGAWHPSDASAYTILSPWKKVFDSASWEQLMHRFI
VPKLQLVLQDFQVNPADQRLDQFNWVMSWASAIPIHLMVDMMDKFFFTKWLQVLYHWLCS
NPNFEEVLNWYKGWKELIPEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYL
RVLEQRQFEAQQKAAAAQANLGGTAHMDGSGNEMSLKDVIEAHAQQHGLLFRPKPGRMHN
GHQIYGFGNVSIIVDSLNQKVYAQTEESWSLVSLERLLDMHNSSLTRRR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaagagatggaaaggtttggcatggagaaggattacgaggacggccaa
tggatcggcggcgagttctattatcgcaagcgcaaggataagcgcgtccagaccaaagac
gatgtactctacggcatattctctgccgattccgacgacgacgatgaagacaacgagggc
tccagaaaacgcaggaaagatcgaaaggtcgtcgaccttaccaagcccgtcaatttcgtc
tccaccggcatcgtcgtgcccaaccaggagatggacaacaattcaaagcagcaaaacgat
gacctcggcgctaccggcgttgccaccagtggccttggctttggtgtcgctacggcttca
ggtttgggttttaataatttgaattccggtttaggttttaattcgaattcggatcccacc
ggtggagaggaggaggatgaggaaaatgacagcaattttttgccgacggcgtttgggaag
aaaataaaggagggagcagagaggagacagaaggagagggaaaagctcaaattgctgaag
caaactactatccaatctcgaagtcgaagagattctgaagaatctcagtttggactagga
ggagcaagtggcggcggcggggatgggggcctgggggcctttgagaaacacaccaagggc
attgggatgaggatgcttaagaacatgggctacaaaggaggtggacttggcaaaaaccag
caagggattctcgctcctattgaagccaagttgaggccaaaaaatatgggtatgggtttt
aatgattacgaggagactaaaatcaagaggcctggcttgcaagaattggaagctgaaaag
ccgagcaagcctttgcccgctgtcagttcctccaccaccaccaaaaagagcctttcctgg
aaaaaggccgttgccaacagggctaataaggaccactatgtctctgccaaggagttgtta
gccaagaagcaggaagagagtaccgaggtctttgtgcacaaggtggttgatatgcgcgga
ccccaggttcgagtcttgaccaatttggagaatttgaatgccgaagagaaagccagggaa
gaggatattcccatgcctgagctacagcacaacctgaggttgattctggacttagctgag
ctggatattcagaagattgatagggatctaaggaatgagagggacacggcgatcagcttg
aaccaggagaaagagaggctggcaacggaggtggccagacagaagcaacacttggatagc
ttgggggatattatgaacgtgttagaccgactgggagaagagaatatcatgggagcattg
acgctggactccctggcaaaggactttggtgacctacagaagagatacgctgacgactat
aaaatatgcaacttgtcttgtattgcctgttcttttgctatacctctgtttatcaggatg
tttcaaggttgggatcctcttaggaacccgtcccatgggttgaatgtggtatcctcatgg
aagggtttgcttcatggagagggggagagagaacagtaccttgatatttgggataataca
atgccaccttatacccagttggtttccgaggttgtgttacccgcagtgaggattgctggc
gtcaatacctggcaggccaaggaccctgaacccatgcttcgctttttggagtcttgggag
aaattgctaccctcttctgtccttcatgccatattggatatggtagtctttcccaaactg
aaggacgcagttgacttgtgggaacctcaccgggacactgttcccatccatgtatgggtg
catccatggctaccactcttgggacacaagttggaggagttgtatcacacaatacgcttc
aagttgagtaacgttctcggtgcatggcaccccagtgatgcctctgcctataccatactc
tcgccgtggaagaaggtgtttgattcggccagttgggaacaactcatgcatagatttata
gtgcccaagttgcagcttgtcctacaagacttccaagtgaaccctgcagatcaaagactt
gatcagtttaattgggtgatgagttgggcttctgctattccaattcatctaatggtagat
atgatggataagtttttcttcaccaagtggctacaggttttgtatcactggttatgttcg
aacccgaattttgaagaggttttgaattggtataaaggttggaaggaactcattcctgag
gagcttcatgcaaatgaaagtatccggtatcagcttaattgtggtcttgacatgatgaat
cgggctgttgagggtatggaggtggtccaacctggtttgaaagagaatattagctacctt
agggtgcttgagcaaaggcaatttgaggcacaacagaaagcagcagcagcacaagcaaac
ttgggtggcactgctcacatggatggcagtggtaatgagatgagcttgaaagatgttatt
gaagcccatgcgcagcagcatggtctgttatttaggcctaaacctgggcggatgcataat
ggtcaccagatatatggctttggtaatgtaagcataatagtcgactctctaaatcaaaag
gtatatgcccaaacagaggaaagctggtctcttgtatcccttgaaaggttgcttgacatg
cacaatagttctcttacaagaagacgctga
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