Prunus dulcis (almond): 117625226
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Entry
117625226 CDS
T07328
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Module
pdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117625226
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117625226
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
117625226
NCBI-ProteinID:
XP_034212722
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Position
4:complement(7649699..7653253)
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AA seq
706 aa
AA seq
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MKKIFVLILIVWTGFGHGQRTFDVLDYGAVGDGKTDDSKAFLKAWGELCGAADEPNGVPT
LVIPEMKAFLLQPIKFRGPCNSNGVHVQIMGKLVAPKMLDGWTECESDSDWLQFKDVGNL
VVDGSGEIDGQGSSWWTTTNQYDRLSRKLMMNKQNCKAPDALHFHGCDNLKLSGLTHLNS
ARAHIAISRCNNVYVSHLTITAPEDSPNTDGIDISNSRNVFIQNSAIGTGDDCIAINGGC
YDLNIANIACGPGHGISVGSLGANGALETVQNVYVRDSSFSGTTNGARIKTWQGGSGYAK
NITFEKITLDAAKNPIIIDQFYCNNDHNCKSQASALLVEDVKYIDFEGTSANEEAIKLDC
DQNSGCRNIIMDRIKITSVVPDKKIYASCNNAIGTSIGTIVPNVPCLKSGTEPTTSPPAM
PLPTVPLPATPPPSLPLPVMPPPSPPVPVMPPPSPPVPVMPPPSLPVPVMPPPSPPVPVM
PLPVPVMPPPSPPVPVIPPPSSSVPVIPPPSPPVLVMPPPSPPLPAAPPLVLILPAPPLP
ETPPPLPATPHPSPLLPATPPQSPPLPAMPPQSPLLPATPPQSPPLPAMPPQSPPLPATP
PSSPPLPATPPPLQVMPPPLLNRPRPTLPLPTTPPPVPLLTPLAPLVPTLPPPTPPPIPQ
MSFTGEPGVPDIYFTPGASSATKLHKKHYIWCQLLIVCVLTRLLFG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatatttgttttgattttgatagtctggactggttttggacatggccaaaga
acgtttgatgttctcgactacggtgctgttggagatggaaaaactgacgattccaaggct
tttctaaaagcatggggagagttgtgtggagcagcagatgaacctaatggcgtgccaaca
cttgttataccagagatgaaagcattcttattgcaacccatcaagtttcgaggtccttgc
aactcaaatggtgttcatgttcagatcatgggcaaactggtggcacctaaaatgctggat
ggatggaccgagtgtgaatcagattcagattggctccaattcaaggatgtgggcaatctc
gtagttgatggttcaggagaaatcgacggtcagggttcatcttggtggaccactaccaac
caatacgacagattatcacgcaaactcatgatgaacaagcagaattgcaaagcaccagat
gctctgcacttccatggatgcgataatcttaaactaagtggacttactcatctaaacagc
gcaagagcccacattgctataagcaggtgcaacaatgtgtatgtgtctcatctcaccata
accgcacctgaagacagtccaaacactgatggcattgacatctcaaactcacgcaatgtc
ttcattcaaaactctgctatcggaaccggcgatgactgcatagccatcaacggtggctgc
tacgatctcaacattgccaacatcgcgtgtgggccgggtcatggtattagtgtgggaagc
ttgggagcgaatggggctcttgagacagtgcaaaatgtgtacgtgagagatagtagtttt
agtgggactacaaatggagctaggatcaagacatggcagggaggatcggggtacgctaag
aacataacctttgagaagatcacactcgatgcagctaaaaatcccatcatcattgaccag
ttttattgtaataatgatcacaactgtaaaagtcaagcctcggctctgttggtggaagat
gtgaagtacattgattttgaaggaacatctgcgaatgaggaagcgatcaaattagattgt
gaccagaattcaggttgccgcaacattataatggaccgcatcaaaatcacctcggtggtt
cctgataagaagatttatgcttcttgcaacaatgctattggaacttccattggcaccatt
gtgcccaatgtaccttgcctcaagtcagggacggaaccgactacttctccgccagctatg
cctttgccaaccgtgcctctgccagctacgcctccgccgtctctgcctttgcccgttatg
cctccgccgtctccgcctgtgcccgttatgcctccgccgtctccgcctgtgcctgttatg
cctccgccatctctgcctgtgcctgttatgcctccgccatctccgccagtgcccgttatg
cctctgcctgtgcctgttatgcctccgccatctccgcctgtgcccgttattcctccacca
tcttcgtctgtgcccgttattcctccaccatctccgcctgtgctcgttatgcctccgcca
tctccacctctgccggctgcacctccactagttcttattttgccagctccacccttgcca
gaaacgcctccgcccctaccagctactcctcatccatctccgctcctaccggccacgcct
ccgcagtctccgcccttaccagctatgcctccgcaatctccactcttgccagctacacct
ccgcaatctccacccttgccagctatgcctccgcaatctccgcccttgccagctacgcct
ccgtcatctccacccttgccagctacgcctccgcctctacaggttatgcctccgcctttg
ctaaataggcctcgcccaactctgcctttgccaactacacctccaccagttcctctgctt
acgcccctagctccgctggtaccaactctgcctcccccaactccgccaccaataccacaa
atgtccttcacaggggaaccaggagtgccagatatttacttcacacctggtgcatctagt
gctactaaacttcataagaaacactatatttggtgtcaattactgatcgtgtgtgtgtta
acaagactactgtttggctaa
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